DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-5 and rho-7

DIOPT Version :9

Sequence 1:NP_995679.1 Gene:rho-5 / 2768944 FlyBaseID:FBgn0041723 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_001286324.1 Gene:rho-7 / 36281 FlyBaseID:FBgn0033672 Length:351 Species:Drosophila melanogaster


Alignment Length:127 Identity:31/127 - (24%)
Similarity:50/127 - (39%) Gaps:10/127 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1096 LLTSLCMHAGILHLAITLIFQHLFLADLERLIGTVRTAIVYIMSGFAGNLTSAILVPHRPEVGPS 1160
            :..|...|...:||...:...|.|.......:|..:...||:.:|...:|.|.:......:.|.|
  Fly   188 MFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATSQAGMS 252

  Fly  1161 ASLSGVVASLIALLVWMHWKYLHKPHIALFKLLLLCSVLVGIGTLPYQLNFLGL-LAGVICG 1221
            ...||.:.:|:|   ::..:|.......||...|..|...||..|      :|: .|||:.|
  Fly   253 LGASGAIMTLLA---YVCTQYPDTQLSILFLPALTFSAGAGIKVL------MGIDFAGVVMG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-5NP_995679.1 Rhomboid 1090..1225 CDD:279958 31/127 (24%)
rho-7NP_001286324.1 Rhomboid 186..327 CDD:396315 31/127 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444956
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0705
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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