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Protein Alignment rho-5 and rpn1
DIOPT Version :9
Sequence 1: | NP_995679.1 |
Gene: | rho-5 / 2768944 |
FlyBaseID: | FBgn0041723 |
Length: | 1429 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_922916.1 |
Gene: | rpn1 / 325561 |
ZFINID: | ZDB-GENE-030131-4286 |
Length: | 598 |
Species: | Danio rerio |
Alignment Length: | 177 |
Identity: | 41/177 - (23%) |
Similarity: | 56/177 - (31%) |
Gaps: | 57/177 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 322 SPAPSTSMSMVFSAASSCSPIMTATSSARSGNHRGDDSDSVIV------VPPGGGAMAQIEAENP 380
||.|:.|.:.....||. |..|..:.|| ...||..|. :||....:.:|..||.
Zfish 155 SPYPTRSQTTRVRLASK-----TVESYTKLGN--PTKSDETIEYGPFKDIPPFSQDVMKIHYENN 212
Fly 381 SGTCLHCNTVRRTTGV---------------HQTTQTTGPISPVPISLPVPMAMPVMSGLNEQMP 430
| ..|..:::.||..| |......|| .|..:.|..
Zfish 213 S-PFLTISSITRTIEVSHWGNIAVEETIDLRHTGAHLKGP----------------FSRYDYQRQ 260
Fly 431 SQSLESSMVSVQAKRLEGGGNMAVPPGSNQHQLYRSQMA--SNPRLQ 475
|.|..||:.|.: .:.|.|.|...||.::. |...||
Zfish 261 SDSGISSVKSFK----------TILPASAQDVYYRDEIGNISTSHLQ 297
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
rho-5 | NP_995679.1 |
Rhomboid |
1090..1225 |
CDD:279958 |
|
rpn1 | NP_922916.1 |
Ribophorin_I |
27..448 |
CDD:282456 |
41/177 (23%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG2291 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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