DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-5 and Rhbdf2

DIOPT Version :9

Sequence 1:NP_995679.1 Gene:rho-5 / 2768944 FlyBaseID:FBgn0041723 Length:1429 Species:Drosophila melanogaster
Sequence 2:XP_030101763.1 Gene:Rhbdf2 / 217344 MGIID:2442473 Length:853 Species:Mus musculus


Alignment Length:936 Identity:274/936 - (29%)
Similarity:431/936 - (46%) Gaps:199/936 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 SSMVSVQAKRLEG----GGNMAVPPGSNQHQLYRSQMASNPRLQHIHHQTQQHQSLQVLPQPQNH 496
            |::.||...||:.    ..::.:||..:|....:..|....|....:.::   .|||   :|:..
Mouse     9 SNLPSVSGSRLQSRKPPNLSITIPPPESQAPGEQDSMLPERRKNPAYLKS---VSLQ---EPRGR 67

  Fly   497 -HLSCKKRIG--------MYMRRTTSQFFGVEPSTEAADCALWQGR----HRRLAIRC---FGMF 545
             ....:||.|        ..:|::|:|:|||...        |:|:    |||....|   :|  
Mouse    68 WQEGAEKRPGFRRQASLSQSIRKSTAQWFGVSGD--------WEGKRQNWHRRSLHHCSVHYG-- 122

  Fly   546 DTELEYHMQQAIGGGNEDAGQSNGTNGNYAPDRPDILPVQDAIGMDMTMSGDSRRQKCYTN---- 606
              .|:...|:.:...:::.....||........|.:.|::        :.|..|..:...|    
Mouse   123 --RLKASCQRELELPSQEVPSFQGTESPKPCKMPKVGPLE--------VMGSKRLSQGLGNIVHP 177

  Fly   607 ------------RDFLAGEFVERKASV------GYM----FVAMVSYLVHMFNKRRPIQMHR--- 646
                        |.|...:.|:|..:.      |.:    |.::.|...|:..::|....|.   
Mouse   178 HLLQIVDPLARGRAFRHPDEVDRPHAAHPPLTPGVLSLTSFTSVRSGYSHLPRRKRISVAHMSFQ 242

  Fly   647 ----------------VRCPWQWSRSFA-PIHVQSHSNQQTDADGCLTDGLEAIIDDEVFFDSPC 694
                            .||. ...|||| |      |..:.||    .||.:..  |..||..  
Mouse   243 AAAALLKGRSVLDATGQRCR-HVKRSFAYP------SFLEEDA----VDGADTF--DSSFFSK-- 292

  Fly   695 EITTSAVND--ESSDIGRQAAK--PRPCADQSGVGVSVYMAERQQNGWRTSALNSGGNATSDINL 755
            |..:|..:|  ||..:.....:  |...:..|..||.:.:.|           .|||.|..    
Mouse   293 EEMSSMPDDVFESPPLSASYFRGVPHSASPVSPDGVHIPLKE-----------YSGGRALG---- 342

  Fly   756 TGDQSSHQPGAAHIPLCSSVSSQMQPAMRSSHSTTSTCNRGNRITAQLLD------------GVL 808
                    ||.                           .||.||.:::..            ||:
Mouse   343 --------PGT---------------------------QRGKRIASKVKHFAFDRKKRHYGLGVV 372

  Fly   809 EN-SRRPPLRCIKYFSVNDLDDRTDHRPFFTYWINTVQVVVLILSIICYGIAPIGIGSEQKTGQV 872
            .| ..|...|.|.......|:....|||:||||:..|.:::.:|.|..|||||:|......|..|
Mouse   373 GNWLNRSYRRSISSTVQRQLESFDSHRPYFTYWLTFVHIIITLLVICTYGIAPVGFAQHVTTQLV 437

  Fly   873 LVTSLSLQTVQHVEQRNLWIGPRNIDLVHMGAKFAACMRRDIKITEVVTKTRRHERETACCIRND 937
            |......::|::::|.|.||||.:|||:|:||||:.|:|:|.:|.::|.:.|..||.:.||::||
Mouse   438 LKNRGVYESVKYIQQENFWIGPSSIDLIHLGAKFSPCIRKDQQIEQLVRRERDIERTSGCCVQND 502

  Fly   938 DSGCVQSSQAECSIRGLYPTKSISTWKKWSPSESGPGGRI-------SGSVCGLDPKFCDAPASI 995
            .|||:|:.:.:||       ::::|:.||. :::||..:.       |..||..||:.|:.|||.
Mouse   503 RSGCIQTLKKDCS-------ETLATFVKWQ-NDTGPSDKSDLSQKQPSAVVCHQDPRTCEEPASS 559

  Fly   996 APYEWPDDITKWPICRKTNSFTQRYRYKDHTS-EHMVCEVIGHPCCTGLYGECRITTREYCDFIK 1059
            ..:.|||||||||||      |::.: .:||. .|:.|::.|.|||.|..|.|.|||||||:|:.
Mouse   560 GAHIWPDDITKWPIC------TEQAQ-SNHTGLLHIDCKIKGRPCCIGTKGSCEITTREYCEFMH 617

  Fly  1060 GYFHEEASLCSQISCLNNVCGMFPFISVETPDQLYRLLTSLCMHAGILHLAITLIFQHLFLADLE 1124
            |||||:|:||||:.||:.|||:.||::.|.|||.||:..||.:||||:|..::::||...|.|||
Mouse   618 GYFHEDATLCSQVHCLDKVCGLLPFLNPEVPDQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLE 682

  Fly  1125 RLIGTVRTAIVYIMSGFAGNLTSAILVPHRPEVGPSASLSGVVASLIALLVWMHWKYLHKPHIAL 1189
            :|.|..|.:|::|:||..|||.|||.:|:|.||||:.|..|::|.|...| :..|:.|.:|..|.
Mouse   683 KLAGWHRISIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVEL-FQSWQLLERPWKAF 746

  Fly  1190 FKLLLLCSVLVGIGTLPYQLNFLGLLAGVICGCLLTMSLVPFTTFSKYGRKKKINLIWTCVLFHV 1254
            |.|..:...|...|.||: ::.:..:.|.:.|.||..:.:|:.||....:.:|..||...:|...
Mouse   747 FNLSAIVLFLFICGLLPW-IDNIAHIFGFLSGMLLAFAFLPYITFGTSDKYRKRALILVSLLVFA 810

  Fly  1255 VVYTAMIVTFYIHPSEFHSISFVDMF 1280
            .::.::::..||:|..:..|.::..|
Mouse   811 GLFASLVLWLYIYPINWPWIEYLTCF 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-5NP_995679.1 Rhomboid 1090..1225 CDD:279958 55/134 (41%)
Rhbdf2XP_030101763.1 Rhomboid_SP 98..328 CDD:372211 49/264 (19%)
Rhomboid 648..788 CDD:366759 57/141 (40%)
MFS 746..>836 CDD:391944 21/90 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834619
Domainoid 1 1.000 116 1.000 Domainoid score I5939
eggNOG 1 0.900 - - E1_COG0705
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002903
OrthoInspector 1 1.000 - - otm44364
orthoMCL 1 0.900 - - OOG6_100562
Panther 1 1.100 - - LDO PTHR45965
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X418
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.700

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