DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and Slc6a2

DIOPT Version :10

Sequence 1:NP_995644.2 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_112633.2 Gene:Slc6a2 / 83511 RGDID:621822 Length:617 Species:Rattus norvegicus


Alignment Length:562 Identity:136/562 - (24%)
Similarity:248/562 - (44%) Gaps:54/562 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGKWEKPTDYLFACFGLALKL-DIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVVHSFMGQFS 83
            |..|.|..|:|.:..|.|:.| :::...|..:.|.|...::||.|:::|..:|:..:...:|||:
  Rat    56 RETWGKKIDFLLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQFN 120

  Fly    84 SSGFIAAFRLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPWSCEGLKSWH--N 146
            ..|....:::.|.|||:||..|.:......||::.:|..|.:|..||...|||:..| .:|:  |
  Rat   121 REGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCG-HAWNSPN 184

  Fly   147 RTDEYPTLCHPTIYKQHENYTLGVEAPSRLYFDYIRQDYFNTDKRFDISRPLIGLFTLSWALIAI 211
            .||  |.|.:.::...|..|:.....|:..:::........:....||..|...|......:|.:
  Rat   185 CTD--PKLLNASVLGDHTKYSKYKFTPAAEFYERGVLHLHESSGIHDIGLPQWQLLLCLMVVIVV 247

  Fly   212 IFYHFSEPAK-FGKCIRYMVITTMVLVVVCFVRFLFLPGSHKLLWMYITPNTKDFSEGIYSTFI- 274
            :::...:..| .||.:.........::.|..|..:.|||:...:..|:..:.....|.  :.:| 
  Rat   248 LYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEA--TVWID 310

  Fly   275 MALQAF---GAGWGSVIALSSFNGFKTD-------IMSYSWIISFGQIFIYIMFGLVSFMLEQYY 329
            .|.|.|   |||:|.:||.:|:|.|..:       ..:.:.:.||  |..:.:|.::.:|..::.
  Rat   311 AATQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSF--ISGFAIFSILGYMAHEHK 373

  Fly   330 KDISDTIVFHRIMNFWVLFLSSASALNTLGWPNLWTFIYYSMLLLASLTVIATQLFTVLQSLFDE 394
            ..|.|...    ....::|:....|::||.....|..:::.|||...|......:..|:..|.|:
  Rat   374 VKIEDVAT----EGAGLVFVLYPEAISTLSGSTFWAVLFFLMLLALGLDSSMGGMEAVITGLADD 434

  Fly   395 FEKLKERKQEVTFGIICGLAICSFFFCTEHGSFYFAILGIDVILA-HSLLHLLLL--LVVLWIYG 456
            |:.||..::..|..:..|..:.:.|..|:.|.:...:|  |...| .|:|..:|:  :.|.|.||
  Rat   435 FQVLKRHRKLFTCAVTLGTFLLAMFCITKGGIYVLTLL--DTFAAGTSILFAVLMEAIGVSWFYG 497

  Fly   457 QKRFQRDIEFMLG-QPFASWKVFILRYTAPIVFLICMILGIIECIRVHFFFKEV----------- 509
            ..||..||:.|:| :|...|:: ..::.:|...|..:::.||.       ||.:           
  Rat   498 VDRFSNDIQQMMGFKPGLYWRL-CWKFVSPAFLLFVVVVSIIN-------FKPLTYDDYVYPPWA 554

  Fly   510 -FLVLGIILVVLPFLAIPGYGFYYLRQSPGTFLERLKRSCRP 550
             ::..||.|..:  :.:|.|..|......|:..||:.....|
  Rat   555 NWVGWGIALSSM--ILVPAYVIYKFFSIRGSLWERVAYGITP 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_995644.2 SLC5-6-like_sbd 27..496 CDD:271356 119/487 (24%)
Slc6a2NP_112633.2 SLC5-6-like_sbd 56..615 CDD:444915 136/562 (24%)

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