DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and Slc6a1

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_077347.1 Gene:Slc6a1 / 79212 RGDID:620533 Length:599 Species:Rattus norvegicus


Alignment Length:576 Identity:151/576 - (26%)
Similarity:262/576 - (45%) Gaps:83/576 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PKRGKWEKPTDYLFACFGLALKL-DIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVVHSFMGQ 81
            |.|..|:...|:|.:|.|.|:.| :::...|....|.|...::||||.::...||:.::...:||
  Rat    42 PDRDTWKGRFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQ 106

  Fly    82 FSSSGFIAAFRLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPW-SCEGLKSWH 145
            ::|.|.:..::|||:|||:|..:..|:|...|||.:.::..:.:|.|||..|||| .|:  ..|:
  Rat   107 YTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCD--NPWN 169

  Fly   146 NRTDEYPTLCHPTIYKQHENYTL-----GVEAPSRLYFDYIRQDYFNTDKRFDISRPLIGLFTLS 205
              ||.    |       ..||:|     ...|....:...:.|.....||...|..||.....::
  Rat   170 --TDR----C-------FSNYSLVNTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIA 221

  Fly   206 WALIAIIFYHFSEPAKFGKCIRYMVITTMVLVVVCFVRFLFLPGSHKLLWMYITPNTKDFSEGIY 270
            |.|  :.|..:......||.:.:......:::::.|.|.:.|||:.:.:..|||||.:..|:.  
  Rat   222 WVL--VYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDS-- 282

  Fly   271 STFIMALQ----AFGAGWGSVIALSSFNGFKTDIMSYSWII----SFGQIFI-YIMFGLVSFMLE 326
            ..::.|..    ::|.|.||:|||.|:|.|..::...|.|:    |...:|. :::|.:|.||..
  Rat   283 EVWLDAATQIFFSYGLGLGSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAH 347

  Fly   327 QYYKDISDTIVFHRIMNFWVLFLSSASALNTLGWPNLWTFIYYSMLLLASLTVIATQLFTV---L 388
            ...:.|:|...    ....:.||:...|:..|....||..:::||||:..   |.:|..||   :
  Rat   348 VTKRSIADVAA----SGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLG---IDSQFCTVEGFI 405

  Fly   389 QSLFDEFEKLKERKQEVTFGIICGLAICSFFF----CTEHGSFYFAILGIDVILAHSLLHLLLL- 448
            .:|.||:.:|...::|:....:|   |.|:..    .|:.|.:.|.:.........|||.|:.. 
  Rat   406 TALVDEYPRLLRNRRELFIAAVC---IVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFE 467

  Fly   449 -LVVLWIYGQKRFQRDIEFMLG-QPFASWKVFILRYTAPIVFLICMILGIIECIRVHFFFKEVFL 511
             :.:.|.||..||..:|:.|:| :|...||:....:| ||:     :.|:       |.|..|.:
  Rat   468 CVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFT-PII-----VAGV-------FLFSAVQM 519

  Fly   512 V---------------LGIILVVLPFLAIPGYGFYYLRQSPGTFLERLKRSCRPTD 552
            .               :|.::.:...:.||||..|......|:..:||:...:|::
  Rat   520 TPLTMGSYVFPKWGQGVGWLMALSSMVLIPGYMAYMFLTLKGSLKQRLQVMIQPSE 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 134/494 (27%)
Slc6a1NP_077347.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
SLC6sbd_GAT1 2..599 CDD:212075 151/576 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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