DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and slc6a4a

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:586 Identity:151/586 - (25%)
Similarity:259/586 - (44%) Gaps:94/586 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SPDPKRGKWEKPTDYLFACFGLALKL-DIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVVHSF 78
            |.||.|..|.|..|:|.:..|.|:.| :::...|..:.|.|...:|||.|..|...||:..:...
Zfish    86 SLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELA 150

  Fly    79 MGQFSSSGFIAAFR-LAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPW-SCEGL 141
            :|||..||.|:.:: :.|:|||:|:....:......||:..:|..|.:|::|||.|||| :|.  
Zfish   151 LGQFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRATLPWTTCN-- 213

  Fly   142 KSWHNRTDEYPTLCHPTIYKQHENYTLGVEAPSRLYFDYIRQDYFNTDKRFDISRPLIGLFTLSW 206
            ..|:.     |...|......:.::|....:|:..:  |:||..     :..:|..|..|..:||
Zfish   214 NRWNT-----PNCTHYLSTDLNVSWTNNSISPAEEF--YVRQVL-----QVHLSPGLHQLGWVSW 266

  Fly   207 AL-------IAIIFYHFSEPAK-FGKCIRYMVITTMVLVVVCFVRFLFLPGSHKLLWMYITPNTK 263
            .|       ..::::...:..| .||.:........:::::..:|...|||:.:.:..|:.|:.|
Zfish   267 QLALCLLFIFTVVYFSIWKGVKTSGKVVWVTATFPYLVLLILLIRGATLPGAWRGVVFYLKPDWK 331

  Fly   264 DFSEGIYSTFI---MALQAF---GAGWGSVIALSSFNGFKTD-------IMSYSWIISFGQIFIY 315
            .    :.:|.:   .|.|.|   |.|:|.::|.:|:|.|..:       ..|.:.:.||  :..:
Zfish   332 K----LLTTTVWLDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSF--LSGF 390

  Fly   316 IMFGLVSFM-------LEQYYKDISDTIVFHRIMNFWVLFLSSASALNTLGWPNLWTFIYYSMLL 373
            ::|.::.:|       :|...||...::          ||:..|.|:..:.....:..|::.|::
Zfish   391 VIFTVLGYMAEMRQQGVETVAKDAGPSL----------LFIIYAEAIANMPAATFFAIIFFLMII 445

  Fly   374 LASLTVIATQLFTVLQSLFDEFEKLKERKQE-VTFGIICGLAICSFFFCTEHGSFYFAIL----- 432
            :..|......|..|:.::.|||..|..|::| ...|::|...:.:....|..|:|...:.     
Zfish   446 MLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLGLVCVCYLGALSTLTYGGAFVVKLFEEYAT 510

  Fly   433 GIDVILAHSLLHLLLLLVVLWIYGQKRFQRDIEFMLG-QPFASWKVFILRYTAPIVFLICMILGI 496
            |..||    .:..|.::.|.|.||..||..|::.||| .|...|:|      ..|....|.:|.|
Zfish   511 GPAVI----TVVFLEVIAVSWFYGTTRFCNDVQLMLGFAPGLFWRV------CWIAICPCFLLFI 565

  Fly   497 IECIRVHF--FFKEVFL----------VLGIILVVLPFLAIPGYGFYYLRQSPGTFLERLKRSCR 549
            |    |.|  |..||.|          |||..:.|..|:.:|.|..|:|..:.|||.:||.:...
Zfish   566 I----VSFLAFPPEVKLFDYLYPFWTTVLGYCIGVSSFICVPSYMVYHLVTTKGTFQQRLLKGIT 626

  Fly   550 P 550
            |
Zfish   627 P 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 122/506 (24%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:294310 148/581 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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