DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and Slc6a17

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:626 Identity:128/626 - (20%)
Similarity:223/626 - (35%) Gaps:171/626 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGKWEKPTDYLFACFGLALKL-DIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVVHSFMGQFS 83
            |..|.....|:.|..|.::.| :|:...|....|.|...::||.:.::|..:|:..:...:||..
  Rat    60 RPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELAVGQRI 124

  Fly    84 SSGFIAAFR-LAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPWSCEGLKSWHNR 147
            ..|.|..:. :.|...|:|:.|..:.....:||::.:...:.:...||:..||||          
  Rat   125 RRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPWS---------- 179

  Fly   148 TDEYPTLCHPTIYKQHENYTLGVEAP------SRLYFDYIRQDYFNTDKRFDISRPLIGLFTLSW 206
              |.|.:         .|.|:.|..|      :..||.|        .:..|||..:.....|:|
  Rat   180 --ECPVI---------RNGTVAVVEPECEKSSATTYFWY--------REALDISNSISESGGLNW 225

  Fly   207 ALIAIIFYHFSEPA--------KFGKCIRYMVITTMVLVVVCF-VRFLFLPGSHKLLWMYITP-- 260
            .:...:...:|...        ..|| :.|.......:|:.|| ||.|.|.|:...:....||  
  Rat   226 KMTVCLLVAWSIVGMAVVKGIQSSGK-VMYFSSLFPYVVLACFLVRGLLLRGAVDGILHMFTPKL 289

  Fly   261 ----NTKDFSEGIYSTFIMALQAFGAGWGSVIALSSFN--------------------------- 294
                :.:.:.|.....|.    |.|.|:|.|||.||:|                           
  Rat   290 DKMLDPQVWREAATQVFF----ALGLGFGGVIAFSSYNKQDNNCHFDAALVSFINFFTSVLATLV 350

  Fly   295 -----GFKTDIMSYSWIISFGQ-IFIYIMFGLV-----------SFMLEQYYKDISDTIVFHRIM 342
                 |||.:||:...::...: |..|:...::           |.:..:.|.::.:.|:..:..
  Rat   351 VFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLTTKDYSEMYNVIMTVKEK 415

  Fly   343 NFWVL---------------------FLSSASALNTLGWPNLWTFIYYSMLLLASLTVIATQLFT 386
            .|..|                     |::...|:........|:.:::.||:...|..:...:..
  Rat   416 QFSALGLDPCLLEDELDKSVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGSMIGTMAG 480

  Fly   387 VLQSLFDEFEKLKERKQEVTFGIICGLAICSFF----FCTEHGSF-------YFAILGIDVILAH 440
            :...:.|.|:..||.       ...|..:.:||    |....|::       |.|.|.:.||:  
  Rat   481 ITTPIIDTFKVPKEM-------FTVGCCVFAFFVGLLFVQRSGNYFVTMFDDYSATLPLTVIV-- 536

  Fly   441 SLLHLLLLLVVLWIYGQKRFQRDIEFMLG-QP----FASWKVFILRYTAPIVFLICMILGII--- 497
                :|..:.|.||||.|:|.:::..||| :|    |..||     :.:|:...:.....||   
  Rat   537 ----ILENIAVAWIYGTKKFMQELTEMLGFRPYRFYFYMWK-----FVSPLCMAVLTTASIIQLG 592

  Fly   498 ------------ECIRVHFFFKEVFLVLGIILVVLPFLAIP 526
                        |....:.:|....:.|.|.|:.:..|.||
  Rat   593 VSPPGYSAWIKEEAAERYLYFPNWAMALLITLIAVATLPIP 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 116/572 (20%)
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 128/626 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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