DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33296 and slc6a7

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_005161359.1 Gene:slc6a7 / 562050 ZFINID:ZDB-GENE-070112-1492 Length:652 Species:Danio rerio


Alignment Length:644 Identity:144/644 - (22%)
Similarity:271/644 - (42%) Gaps:127/644 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASGTKP----FSP--DPKRGKWEKPTDYLFACFGLALKL-DIFEVSYWFFFNIGFVGMLPYFLYM 65
            ||.::|    .||  .|.|.:|....::|.:|.|..:.| :::...|..:.|.|.|.::|||:.:
Zfish    53 ASQSQPPSSAASPPAQPPRDQWGGKYEFLLSCIGYCVGLGNVWRFPYLCYRNGGGVFLIPYFIML 117

  Fly    66 VIYLVPILVVHSFMGQFSSSGFIAAFRLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSF 130
            ....:|:.::...:||:.::|.|..::..||.||:|...:.::....:||::.:|....:|.:||
Zfish   118 FFTGMPLFLMELSLGQYGAAGPITVWKCCPLLKGIGIGMLCVSTLVCLYYNVIIAWTFYYLGSSF 182

  Fly   131 RPTLPWSCEGLKSWHNRTDEYPTLCHPTIYKQHENYTLGVEAPSRLYFDYIRQDYFNTDKRFD-- 193
            :..|||||:.|::        ..||        .|.|...::||.::::.......::....|  
Zfish   183 QSPLPWSCDALQN--------IALC--------ANKTNSTQSPSEVFWNEKVLGVVHSTGLSDPG 231

  Fly   194 -ISRPLIGLFTLSWALIAIIF---YHFSEPAKFGKCIRYMVITTMVLVVVCFVRFLFLPGSHKLL 254
             :..||......:|.:|.:..   .|.|     ||.:.........:::|..:|...|.||...:
Zfish   232 PVRWPLALCLLAAWIIIFLCMLKGIHSS-----GKVVYVTATFPYFVLLVLIIRGATLEGSLDGV 291

  Fly   255 WMYITPNTKDFSEG-IYSTFIMALQAF---GAGWGSVIALSSFNGFKTDIMSYSWIISFGQ---- 311
            ..|:||.....::. :::.  .|.|.|   |.|.|.:::::|:|.|..:::..:.||:.|.    
Zfish   292 AFYLTPKWDQLADAQVWND--AASQIFYSLGIGVGGLLSMASYNKFDNNVIRDTIIITIGNCSTS 354

  Fly   312 ----IFIYIMFGLVSFMLEQYYKDISDTIVFHRIMNFWVLFLSSASALNTLGWPNLWTFIYYSML 372
                ..|:.:.|.::|........::|:       ...:.|::...||..|.....|:.:::.||
Zfish   355 FFAGFAIFSILGHMAFKKGVPVDKVADS-------GPGLAFVAYPEALALLPGSVFWSILFFLML 412

  Fly   373 LLASLTVIATQLFTVLQSLFDEFEKLKER-KQEVTFGIICGLAICSFFF-------CTEHGSFYF 429
            .:..:..:...:..:..::.|||.:|:.. |.:..|     ||:..|.|       .|:.|.::|
Zfish   413 FMLGVDTLFGNMEGICTAVLDEFPQLRSNLKHKTLF-----LAVLCFSFYLMGLLLITDGGIYWF 472

  Fly   430 AIL-------GIDVILAHSLLHLLLLLVVLWIYGQKRFQRDIEFMLGQ--PF---------ASWK 476
            .::       |:.:|.      |.:.:.:.:.||..:|.:||..|:.:  |:         |.|.
Zfish   473 TLIDSFSTSFGLIIIT------LFMCIGISFFYGVNQFCQDIVDMICRCPPWCTKMLLYFKACWV 531

  Fly   477 VFILRYTAPIVFLICMILG--IIECIRVHF-FFKEVFLV----LGIILVVLPFLAIPGYGFYYLR 534
            ||     .|  ||:..||.  .||..|... :...|:.:    ||:.:..|..|.|..:....:.
Zfish   532 VF-----TP--FLLTFILTYIFIEMYRTSLRYGSYVYPIWGKALGVCMGALCCLQILIWAIVAIS 589

  Fly   535 QSPGTFLERLKRSCRP-TDWYPVEMKHRQHYGDRVGNIEMTD-------HLFNGIEEVN 585
            :..||..:|.|:|.|| ..|             ||.||..:.       |...|...||
Zfish   590 KESGTLKDRFKKSIRPLNSW-------------RVNNINSSSQEQHVEPHTIEGPFTVN 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 111/515 (22%)
slc6a7XP_005161359.1 SLC5-6-like_sbd 71..610 CDD:294310 130/599 (22%)
PotE <235..564 CDD:223605 75/360 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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