DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and Slc6a8

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_059044.1 Gene:Slc6a8 / 50690 RGDID:619711 Length:635 Species:Rattus norvegicus


Alignment Length:628 Identity:151/628 - (24%)
Similarity:250/628 - (39%) Gaps:128/628 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PKRGKWEKPTDYLFACFGLALKL-DIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVVHSFMGQ 81
            |.|..|.:..|::.:|.|.|:.| :::...|..:.|.|.|.::||.|..::..:||..:...:||
  Rat    50 PPRETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQ 114

  Fly    82 FSSSGFIAAFRLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPWSCEGLKSWH- 145
            |..:|.|..:.:.|||||:||.|:.:.|....||.|.:|....:|:.||..||||:..| .:|: 
  Rat   115 FMKAGSINVWNICPLFKGLGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCG-HTWNT 178

  Fly   146 ------------------NRT-DEYPTLCHPTIYKQHENYTL----GVEAPSRLYFDYIRQDYFN 187
                              |.| |:......|.| :..||..|    |:|.|..|           
  Rat   179 PDCVEIFRHEDCANASLANLTCDQLADRRSPVI-EFWENKVLRLSTGLEVPGAL----------- 231

  Fly   188 TDKRFDISRPLIGLFTLSWALIAIIFYHFSEPAKFGKCIRYMVITTMVLVVVCFVRFLFLPGSHK 252
               .::::..|:.    .|.|  :.|..:......||.:.:......|::||..||.:.|||:..
  Rat   232 ---NWEVTLCLLA----CWVL--VYFCVWKGVKSTGKIVYFTATFPYVVLVVLLVRGVLLPGALD 287

  Fly   253 LLWMYITPNTKDFSE-GIYSTFIMA----LQAFGAGWGSVIALSSFNGFKTDIMSYSWI---ISF 309
            .:..|:.|   |:|: |....:|.|    ..::..|.|::.||.|:|.|..:....:.|   |:.
  Rat   288 GIIYYLKP---DWSKLGSPQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALINS 349

  Fly   310 GQIFI--YIMFGLVSFMLEQYYKDISDTIVFHRIMNFWVLFLSSASALNTLGWPN---------L 363
            |..|.  :::|.::.||..:....||..             ..|...|..:.:|.         |
  Rat   350 GTSFFAGFVVFSILGFMATEQGVHISKV-------------AESGPGLAFIAYPRAVTLMPVAPL 401

  Fly   364 WTFIYYSMLLLASLTV-------IATQLFTVL-QSLFDEFEKLKERKQEVTFGIICGLA-ICSFF 419
            |..:::.||||..|..       ..|.|..:| .|.:..|::      |::..:.|.|. :....
  Rat   402 WAALFFFMLLLLGLDSQFVGVEGFITGLLDLLPASYYFRFQR------EISVALCCALCFVIDLS 460

  Fly   420 FCTEHGSFYFAILGIDVILAHSLLHLLL--LLVVLWIYGQKRFQRDIEFMLGQPFASWKVFILRY 482
            ..|:.|.:.|.:.........:||....  .:||.|:||..||..||..|:|.....|..:...:
  Rat   461 MVTDGGMYVFQLFDYYSASGTTLLWQAFWECVVVAWVYGADRFMDDIACMIGYRPCPWMKWCWSF 525

  Fly   483 TAPIVFLICMILGIIECIRVHFFFKEVFL----------------VLGIILVVLPFLAIPGYGFY 531
            ..|   |:||  ||       |.|..|:.                .:|....:...|.:|.:...
  Rat   526 FTP---LVCM--GI-------FIFNVVYYKPLVYNNTYVYPWWGEAMGWAFALSSMLCVPLHLLG 578

  Fly   532 YLRQSPGTFLERLKRSCRPTDWYPVEMKHRQHYGDRVGNIEMT 574
            .|.::.||..||.:...:|. |....:::|....|..|...:|
  Rat   579 CLLRAKGTMAERWQHLTQPI-WGLHHLEYRAQDADVRGLTTLT 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 129/523 (25%)
Slc6a8NP_059044.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47
SLC6sbd_CT1 52..621 CDD:271397 150/626 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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