DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and RGD1562492

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001102616.1 Gene:RGD1562492 / 499151 RGDID:1562492 Length:743 Species:Rattus norvegicus


Alignment Length:685 Identity:122/685 - (17%)
Similarity:233/685 - (34%) Gaps:227/685 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PDPKRGK--------WEKPTDYLFACFGL---------------ALKLDIFEVSYWFFFNIGFVG 57
            |:||:.:        .:|.||.....:|.               |.|.:...:...|...:|...
  Rat     9 PEPKKEEPTEEEPTASKKSTDPTSLSWGFKTREVRITKISSHFQAKKTENILILVAFSIGLGSTW 73

  Fly    58 MLPY-----------FLYMVIYL---VPILVVHSFMGQFSSSGFIAAFR-LAPLFKGMGYVSIFL 107
            ..||           .:|:::.|   :|::.:...:||:.....|.|:: |.|...|:||.|:..
  Rat    74 RFPYLCHQNGGGSFLLMYLILLLLLGIPLMYMEMVIGQWLRVDNIRAWKHLVPWLSGVGYSSMLA 138

  Fly   108 TFTTLIYYSMFVAIPLLFLINSFRPTLPW-SCEGLKSWHN------RTDEYPTLCHPTIYKQHEN 165
            ....::|.|..|:..|.:|..||....|| :|..:|::..      ||:.:....:.|:.:..:.
  Rat   139 CALVILYNSALVSWSLFYLGQSFDYPTPWENCPLVKNFSTSDISCLRTEPHQFFWYHTVLRASDQ 203

  Fly   166 YTLGVEAP---------SRLYFDYIRQDYFNTDKRFDISRPLIGLFTLSWALIAIIFYHFSEPAK 221
            ...|:|..         :..:|.||..          ::|..|.:..:   :.:|:|.:      
  Rat   204 IEEGIEVLVLNVTLCLFATWFFLYITM----------VTRIKISVLMM---IFSILFPN------ 249

  Fly   222 FGKCIRYMVITTMVLVVVCFVRFLFLPGSHKLLWMYITPNTKDFSEGIYSTFIMA---------- 276
                         ||:...|....|:.|....|...:|....          |:|          
  Rat   250 -------------VLLFCFFTHIFFVKGVRDSLKRLVTTELS----------ILASLDAWRQAGG 291

  Fly   277 --LQAFGAGWGSVIALSSFNGFKTDIMSYSWIISFGQIFIYIMFGLVSFMLEQYYKDISDT-IVF 338
              |.:.|.|.|::|..||:.....:.:.::..::...:...::...|.|::..::.:.|.| .|.
  Rat   292 HVLYSLGLGMGTIITFSSYQTRGENYIKWASFVAMVNLMTSLLSSSVIFLMLGFWIENSGTPCVE 356

  Fly   339 HRIMNFWVLFLSSASALNTLGWP------------------------------------------ 361
            ..:.|  :|.|.:...|..:.||                                          
  Rat   357 SNVSN--LLSLIANGVLPQVAWPPKDIIHRSPLEYLDWISQLPKNIRNEVAHFTLPCSILVQKEK 419

  Fly   362 ----------------------NLWTFIYYSMLLLASLTVIATQLFTVLQSLFDEFEKLKERKQE 404
                                  :.|..|::..|::..|..:.|.:..:..||......|::..:.
  Rat   420 FMEGPGLAYVAFSQAITLFPGSSFWAIIFFMSLVIMGLGTMTTLVEGIALSLQKSISTLEKHPKL 484

  Fly   405 VTFGIICGLAICSFFFCTEHGSFYFAILGIDVILAHSLLHLLLLLVV-------LWIYGQKRFQR 462
            |...|..|..:.|..|.:..||:      :..:....|:.::|:::|       .|:||.|||:.
  Rat   485 VPVIICLGGFLGSLVFSSRPGSY------VVFLFDDHLVPMVLIMIVAFQNLSLAWVYGIKRFRA 543

  Fly   463 DIEFMLGQ----PFASWKVFILRY-TAPIVFLICMILGIIECIRVHFFFKEVF------------ 510
            ::...||:    ||    .|:..| |.|.:.::..|..:      :.:|.|..            
  Rat   544 EMFGQLGRLVWAPF----TFLWSYVTLPTLLVLLTIYFL------NLYFSESLSYVSWNNSMSQE 598

  Fly   511 -------LVLGII--LVVLPFLAIPGY---GFYYL 533
                   :.||.:  |.||..|.||.|   .::||
  Rat   599 VKQPYQRIALGWVTFLSVLALLPIPMYPLQHWWYL 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 105/603 (17%)
RGD1562492NP_001102616.1 SLC5-6-like_sbd 50..621 CDD:382020 109/630 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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