DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33296 and slc6a19b

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:645 Identity:139/645 - (21%)
Similarity:252/645 - (39%) Gaps:144/645 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGKWEKPTDYLFACFGLALKL-DIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVVHSFMGQFS 83
            |.||:....|:..|.|..:.| :::...|....:.|...|:|:.:.:|...:|:|.:...:||..
Zfish    33 RPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEGIPLLHLEFAIGQRL 97

  Fly    84 SSGFIAAFR-LAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPWSCEGLKSWHNR 147
            ..|.:..:| :.|...|:|..|:.::|...:||:..:|..:.:..|||:..||||...:.  .||
Zfish    98 RKGSVGVWRTINPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFFNSFQDPLPWSQCPIN--ENR 160

  Fly   148 TDEYPTLCHPTIYKQHENYTLGVEAPSRLYFDYIRQDYFNTDKRFDISRPLIGLFTL----SWAL 208
            |...|. |             |..:|.. ||.|  ::..||....|.:..|.....|    :||:
Zfish   161 TGPIPE-C-------------GKSSPVD-YFWY--RETLNTSAAIDDTGGLQVWMVLCLISAWAV 208

  Fly   209 IAIIFYHFSEPAKFGKCIRYMVITTMVLVVVCF-VRFLFLPGSHKLLWMYITPNTKDFSEGIYST 272
            :.:......|..  ||.: |:..|...||:..| :|.|.|.||...:....||:..:.:..  ||
Zfish   209 LYVCCIRGIETT--GKAV-YVTSTLPYLVLTIFLIRGLTLKGSVDGIKFLFTPDINELANP--ST 268

  Fly   273 FIMA----LQAFGAGWGSVIALSSFNGF----KTDIMSYSWIISFGQIF----IYIMFGL----- 320
            ::.|    ..:|...:|.:|:.||:|..    :.|.:..|.|.:|..|:    ||.:.|.     
Zfish   269 WLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEQDAVIISVINAFTSIYAATVIYSIIGFRATER 333

  Fly   321 -------------------VSFMLEQYYKDISDTI---------------------VFHRIMNFW 345
                               ..|:.:..|:|:..::                     :...:....
Zfish   334 FDDCMNGNILTLLNTFDLPEGFINQSNYQDVFQSLNSTSPDIISSLSLKTCDLNNFLSEGVEGTG 398

  Fly   346 VLFLSSASALNTLGWPNLWTFIYYSMLLLASLTVIATQLFTVLQSLFDEFEKLKERKQEVTFGII 410
            :.|:....|:..:....||:.:::.||....|:.:...:..||..|.|.....|...:|:..|:.
Zfish   399 LAFIVFTEAITKMPLSPLWSVLFFIMLFCLGLSSMFGNIEGVLVPLQDLGVFPKSWPKEIISGVT 463

  Fly   411 CGLAIC--SFFFCTEHGSFYFAILGIDVILAHSLLHLLL----LLVVLWIYGQKRFQRDIEFMLG 469
            | |..|  ...|....|:::.|:..   ..|.|:..|::    ::.|:::||..||..|:.||:|
Zfish   464 C-LVCCLVGLIFVQGSGNYWLALFD---SFAGSIPLLIIAFSEMIGVVYVYGIDRFNEDLIFMIG 524

  Fly   470 -QPFASWKVFILRYTAPIVFLICMILGIIECIRVHFFF-----KEVF------------------ 510
             :|...|:. ..|:.:|::.|...:          |:|     ||:|                  
Zfish   525 HKPNIFWQA-TWRFISPLIMLAIFV----------FYFSTTVTKEIFYSAWDPESENFPTLEKKP 578

  Fly   511 -----LVLGIILVVLPFLAIPGYGF------YYLRQSPGTFLERLKRSCRPTDWYPVEMK 559
                 .|:..:|..:|.||:||...      |..::.|...:::|.........:..|:|
Zfish   579 YPTWIYVIIFLLAGVPSLAVPGTAVFRAIRDYCCKKHPSASIQQLDSVSYKVQMHDEEVK 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 119/539 (22%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 135/618 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.