DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33296 and Slc6a17

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001280618.1 Gene:Slc6a17 / 229706 MGIID:2442535 Length:727 Species:Mus musculus


Alignment Length:635 Identity:130/635 - (20%)
Similarity:221/635 - (34%) Gaps:189/635 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGKWEKPTDYLFACFGLALKL-DIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVVHSFMGQFS 83
            |..|.....|:.|..|.::.| :|:...|....|.|...::||.:.::|..:|:..:...:||..
Mouse    60 RPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELAVGQRI 124

  Fly    84 SSGFIAAFR-LAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPWSCEGLKSWHNR 147
            ..|.|..:. :.|...|:|:.|..:.....:||::.:...:.:...||:..||||          
Mouse   125 RRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPWS---------- 179

  Fly   148 TDEYPTLCHPTIYKQHENYTLGVEAP------SRLYFDYIRQDYFNTDKRFDISRPLIGLFTLSW 206
              |.|.:         .|.|:.|..|      :..||.|        .:..|||..:.....|:|
Mouse   180 --ECPVI---------RNGTVAVVEPECEKSSATTYFWY--------REALDISNSISESGGLNW 225

  Fly   207 ALIAIIFYHFSEPA--------KFGKCIRYMVITTMVLVVVCF-VRFLFLPGSHKLLWMYITP-- 260
            .:...:...:|...        ..|| :.|.......:|:.|| ||.|.|.|:...:....||  
Mouse   226 KMTLCLLVAWSIVGMAVVKGIQSSGK-VMYFSSLFPYVVLACFLVRGLLLRGAVDGILHMFTPKL 289

  Fly   261 ----NTKDFSEGIYSTFIMALQAFGAGWGSVIALSSFN--------------------------- 294
                :.:.:.|.....|.    |.|.|:|.|||.||:|                           
Mouse   290 DKMLDPQVWREAATQVFF----ALGLGFGGVIAFSSYNKQDNNCHFDAALVSFINFFTSVLATLV 350

  Fly   295 -----GFKTDIMSYSWII--------------------------------SFGQIFIYIM----- 317
                 |||.:||:...::                                .:.:::..||     
Mouse   351 VFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLTTKDYSEMYSVIMTVKEK 415

  Fly   318 ----FGLVSFMLE-QYYKDISDTIVFHRIMNFWVLFLSSASALNTLGWPNLWTFIYYSMLLLASL 377
                .||...:|| :..|.:..|         .:.|::...|:........|:.:::.||:...|
Mouse   416 QFPALGLDPCLLEDELDKSVQGT---------GLAFIAFTEAMTHFPASPFWSVMFFLMLINLGL 471

  Fly   378 TVIATQLFTVLQSLFDEFEKLKERKQEVTFGIICGLAICSFF----FCTEHGSF-------YFAI 431
            ..:...:..:...:.|.|:..||.       ...|..:.:||    |....|::       |.|.
Mouse   472 GSMIGTMAGITTPIIDTFKVPKEM-------FTVGCCVFAFFVGLLFVQRSGNYFVTMFDDYSAT 529

  Fly   432 LGIDVILAHSLLHLLLLLVVLWIYGQKRFQRDIEFMLG-QP----FASWKVFILRYTAPIVFLIC 491
            |.:.||:      :|..:.|.||||.|:|.:::..||| ||    |..||     :.:|:...:.
Mouse   530 LPLTVIV------ILENIAVAWIYGTKKFMQELTEMLGFQPYRFYFYMWK-----FVSPLCMAVL 583

  Fly   492 MILGII---------------ECIRVHFFFKEVFLVLGIILVVLPFLAIP 526
            ....||               |....:.:|....:.|.|.|:.:..|.||
Mouse   584 TTASIIQLGVSPPGYSAWIKEEAAERYLYFPNWAMALLITLIAVATLPIP 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 118/581 (20%)
Slc6a17NP_001280618.1 SLC6sbd_NTT4 60..648 CDD:271403 130/635 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.