DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33296 and snf-10

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_505682.2 Gene:snf-10 / 191769 WormBaseID:WBGene00004909 Length:673 Species:Caenorhabditis elegans


Alignment Length:626 Identity:133/626 - (21%)
Similarity:245/626 - (39%) Gaps:131/626 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KWEKPTDYL--FACFGLALKLDIFEVSYWFF-FNIGFV-GMLPY---FLYMVIYLVPILVVHSFM 79
            |||..|..|  ..|.|          :.||| :..|:. |..||   |.|:.| .||:|.:.:.:
 Worm    83 KWEAITATLSFVTCSG----------NIWFFPYLCGYYGGWFPYQFTFCYVFI-AVPLLYLETAL 136

  Fly    80 GQFSSSGFIAAF-RLAP----LFKGMGYVSIFLTFTTLIY--YSMFVAIPLLFLINSFRPTLPW- 136
            ||::|:..::.| |:||    |..||.::.:|.|.:..::  |.:.:   ......|...|.|| 
 Worm   137 GQYASASPLSVFSRMAPAMAGLSAGMCFIMVFRTISLSVWAIYDLTI---FTHASQSIWSTSPWE 198

  Fly   137 SCEGLKSW----HNRTDEYPTLCHPTIYKQHENY------TLGVEAPSRLYFDYIRQDYFNTDKR 191
            ||:..:|.    :.:.....|...|...|:.:.|      |.|.:.....:..::....:.....
 Worm   199 SCQESQSGDYCVNYKLSSKCTWIQPGSDKECDEYQEMLIATRGFQQRKSPFMSFVHGLMYKRSIT 263

  Fly   192 FDISRP-----LIGLFTLSWALIAIIFYHFSEPAKFGK----CIRYMVITTMVLV---------V 238
            .:...|     :|....| |.:|.||....|:  ..|:    .:..:::.|::|:         .
 Worm   264 MNDWEPPSVTSIICAVCL-WIIIGIISIGGSK--VLGRTGIVALTLLLVGTIMLLSYGMSLNDTT 325

  Fly   239 VCFVRFLFLPGSHKLLWMYITPNTKDFSEGIYSTFIMALQAFGAGWGSVIALSSFNGFKTDIMSY 303
            ..|..|.:....::..||::.......:.        ||:|...|.|.:...:|.|.|...|...
 Worm   326 NVFTAFFYQSEGYEDKWMWVWSWADAAAH--------ALRALNVGCGGIQKFASLNNFHNKIHRD 382

  Fly   304 SWIISFGQIFIYIMFGLVSFML-----EQYYKDI--SDTIVFHRIMNFWVLFLSSASALNTLGWP 361
            ..:||......||..||:|||.     ..||.|:  |:.|..:.........:|.....:::|  
 Worm   383 VLLISIVSFVFYICTGLLSFMFMAEIGRLYYPDLEASERIQLYATPVMIESVISEILTNSSMG-- 445

  Fly   362 NLWTFIYYSMLLLASLTVIATQLFTVLQSLFDEFEKLKER---------KQEVTFGI--ICGLAI 415
            ::|.|:::..|...|:..|::.::.:...:.:.....:.:         |:.:...|  :.|| |
 Worm   446 SIWVFLFWLTLAACSIQGISSYIWVISSMIVERLNGSRRKYGKALASWHKRAIILAIMSVTGL-I 509

  Fly   416 CSFFFCTEHGSFYFAILGIDVILAHSLLHLLL--LLVVLWIYGQKRFQRDIEFML---GQP---- 471
            .|..|....|....:  .|:...::..:.:..  ::.|.::||.|||..:|..|:   |.|    
 Worm   510 SSLPFLGNGGINLMS--SIETFASYGTIFIAFVEVITVSYVYGFKRFSVNIRAMIGGHGPPNVFW 572

  Fly   472 FASWKVFILRYTAPIVFLICMILGIIECIRVHFFFKEVF--------------LVLGIILVVLPF 522
            :.:|.|.     :||:.::     ...||...|..|:.|              ||:..|.|:|.|
 Worm   573 WLNWLVI-----SPILLIV-----TFGCIVATFGQKKAFNENSIVSDPIGYSLLVMPCIFVILYF 627

  Fly   523 LAIPGYGFYYLRQSPGTFLERLKRSCRPTDWYPVEMKHRQH 563
            |.    ..|..|::...|:..::.:   .||.|:..:.|::
 Worm   628 LR----DEYDRRKNMEPFVVMIRAT---GDWGPMNPEDRRN 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 111/538 (21%)
snf-10NP_505682.2 SNF 78..628 CDD:264495 124/584 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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