DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and snf-6

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001367976.1 Gene:snf-6 / 191768 WormBaseID:WBGene00004905 Length:714 Species:Caenorhabditis elegans


Alignment Length:599 Identity:146/599 - (24%)
Similarity:261/599 - (43%) Gaps:84/599 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGKWEKPTDYLFACFGLALKLDIFEVSYWFF-FNI----GFVGMLPYFLYMVIYLVPILVVHSFM 79
            ||.|...:|||.|..|....:.    |:|.| |.:    |...::||...:.:..:|:..:...:
 Worm    64 RGNWSNKSDYLLAVIGFTAGVG----SFWKFPFLVFQHGGAAFLVPYLCMLCLASLPMFFMEMVL 124

  Fly    80 GQFSSSGFIAAFRLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPWS-CEGLKS 143
            ||||||..|:.:::.|||||:|:..:.::....:::::..|..|.:|||||..::||| |....|
 Worm   125 GQFSSSAAISVWKVVPLFKGIGFAQVTISGFFAVFFNIISAWTLFYLINSFSFSIPWSNCANSWS 189

  Fly   144 WHNRT---------------------DEYPTLCHPTIYKQHENYTLGVEAPSRLYFDYIRQDYFN 187
            ..|.|                     .|:.:....|:...|:   || ..||..||   ..|...
 Worm   190 GENCTLGTRIQCKEMNGTLLVNGSCIVEHASSNETTVIPLHD---LG-SIPSLKYF---HNDVLM 247

  Fly   188 TDKRFDISRPLIGLFTLSWAL--------IAIIFYHFSEPAKFGKCIRYMVITTMVLVVVCFVRF 244
            ..|..|      ...||:|.|        ||:....|......||.:...||...:::.|...|.
 Worm   248 LSKGVD------DFGTLNWYLGLCVLACWIAVFLCLFQGVKSSGKVVYVAVIVPFIILTVLLTRL 306

  Fly   245 LFLPGSHKLLWMYITPNTKDFSEGIYSTFIMALQAF---GAGWGSVIALSSFNGFKTDIMSYSWI 306
            |.|.||...::.::||..:...: ::.....|:|||   ....|.:..::|::.|..:|....|:
 Worm   307 LTLDGSLAAVFYFLTPKWEILMD-LHVWGEAAVQAFYSVSCCSGGLFTIASYSRFHNNIYKDIWL 370

  Fly   307 ISFGQIFIYIM-----FGLVSFMLEQYYKDISDTIVFHRIMNFWVLFLSSASALNTLGWPNLWTF 366
            :....:.:.::     |..:.|...::...:..   ||....|.::|:..|.||..:....|:..
 Worm   371 VLIVDVIVSLVGCLLTFSAIGFTCYEFAISLDK---FHIRDGFHLVFVFLAEALAGVSVAPLYAG 432

  Fly   367 IYYSMLLLASLTVIATQLF---TVLQSLFDEF-EKLKERKQEVTFGIICGLAI-CSFFFCTEHGS 426
            :::.|:|   |.|.|||:|   |::.|:.||: |:|:..::.| ...:|.|.| .|..||...|.
 Worm   433 LFFIMIL---LVVHATQMFVVETIVSSICDEYPERLRRNRRHV-LTTVCALFILLSIPFCLSSGL 493

  Fly   427 FYFAILGIDVILAHSLLHLLLL--LVVLWIYGQKRFQRDIEFMLG--QP-FASWKVFILRYTAPI 486
            |:..:| ...:|...|:.:..|  :.:.|:||......:.::::|  .| :..||: :.::..|:
 Worm   494 FWMELL-TQFVLTWPLVVIAFLECMAINWVYGVDNMLDNAKWIVGYWPPCYIFWKI-LFKFICPM 556

  Fly   487 VFL--ICMILGIIECIRVHFF-FKEVFLVLGIILVVLPFLAIPGYGFYYLRQSPGTFLERLKRSC 548
            |:|  :|.:......|:...: |....::....:...|.:.||..|.:....:.||..::..|..
 Worm   557 VYLAILCFLWLDWNSIQYESYQFPYWSILTAWCIASFPLILIPIVGIWQFCIAKGTITQKWWRVL 621

  Fly   549 RPTD-WYPVEMKHR 561
            .|.| |.|....||
 Worm   622 YPDDAWGPAMAIHR 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 128/523 (24%)
snf-6NP_001367976.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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