DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33296 and F56F4.3

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_491770.3 Gene:F56F4.3 / 186398 WormBaseID:WBGene00018980 Length:701 Species:Caenorhabditis elegans


Alignment Length:658 Identity:140/658 - (21%)
Similarity:245/658 - (37%) Gaps:175/658 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KPTDY-----LFACFGLALKLDIFEVSYWFFFNIGFV-GMLPYFLYMVIYLVPILVVHSFMGQFS 83
            :|:.|     |.:|..| ||.::..:.  .|||.|.| ..:|||:.:.:..||:.:....:.|||
 Worm   105 RPSTYRQLSLLLSCVTL-LKNNMVFIE--CFFNHGGVYFFVPYFIILFVLGVPMAIFELSLAQFS 166

  Fly    84 SSGFIAAF-RLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPWSCEGLKSWHNR 147
            |......| |:||:..|:.::.:.|.    |.|::::|....||:.::: :......|..:|.:.
 Worm   167 SIPMNGMFTRMAPMLGGIPWLILCLR----IIYTVYIAFDPRFLLYAYK-SFVTVITGNMNWIHC 226

  Fly   148 TDEYPTLC-HPTIYKQHENYTLGVEAPSRLYFDYI--RQDYFNTDKRFDISRPLIGLFTL----S 205
            .|.....| .||...:...:.|..|....::...:  :|||              ||.|.    .
 Worm   227 DDYKGVRCFDPTWSCKINEFRLNGECVKDVHIRKLAQQQDY--------------GLLTYFGLRE 277

  Fly   206 WALIAIIFYHFSEPAKFGKCIRYMVITTMVLVVVCFVR-------------------FLFLP--- 248
            :.||:||      |::..|.|..:.|...:|..:.|:.                   |:|||   
 Worm   278 YRLISII------PSQIYKEINGLDIMDNILAALVFLLIAGFITYKGHRFFASLAGFFVFLPILG 336

  Fly   249 ------------GSHKLLWMYITPNTKDFSEGIYS----TFIMALQAFGAGW------------- 284
                        ||.|          |.|...|..    |.|..|.|    |             
 Worm   337 MIPAVILVYYDVGSRK----------KHFFNQILKNNDITKIFELSA----WLNAARVTVKTVYI 387

  Fly   285 --GSVIALSSFNGFKTDIM-----------SYSWIISFGQI-FIYIMFGLVSFMLEQYYKDI--- 332
              |:::||.|...|:.:.:           :|..::.||.: .:|:    .:.:|..:.|.:   
 Worm   388 ADGTLMALGSRADFRHNFIKDAVLLAASGATYRLLLCFGILPILYV----ANDILYPFAKTVYAR 448

  Fly   333 SDTIVFHRIMNFWVLFLSSASALNTLGWPNL---WTFIYYSML-------LLASLTVIATQLFTV 387
            .|.:.||.|..|:       |||.:...|.:   .||..|:||       .:|...:....|...
 Worm   449 GDLVQFHAIELFF-------SALPSYAIPGISPTVTFFVYAMLYGTINFAFVAYQVITFEMLINA 506

  Fly   388 LQSLFDEFEKLKERKQEVTFGIICGLAICSFFFCTEHGSFYFAI-----LGID--VILAHSLLHL 445
            |..||.....||::...:.. |:..:.:..|.:.........|:     |.||  |:...|....
 Worm   507 LHHLFPRLLYLKQKSVRICI-IMATVTLLLFLYILSLPYKQLAVGYQKELAIDDYVVGLVSTTVF 570

  Fly   446 LLLLVVLWIYGQKRFQRDIEFMLGQPFASWK------VFIL---RYTAPIVFLICMILGIIECIR 501
            :.|:.|..:||.||...:...||.....::|      ||:.   .:..||..|:.:...|::..:
 Worm   571 IQLISVSIVYGYKRLLINFLTMLKHHPVTYKLVEKCRVFLYVMWAFFLPISCLVSICSIIVKKYQ 635

  Fly   502 VHFFFKEVFLVLGIILVVLPFLAIP-GYGFYYLRQSPGTFLERLKRSCRPTDWYPVEMKHRQ--H 563
            ::.:    .|||...:..||.:.:. ....|.:|:.   |:..|.::.|   |.|....|.:  .
 Worm   636 IYHW----PLVLYAAISALPLIYLARKLTMYIMRKE---FVSGLSQTHR---WQPANEGHAREVE 690

  Fly   564 YGDRVGNI 571
            :.:|...:
 Worm   691 HDERASGV 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 124/576 (22%)
F56F4.3NP_491770.3 SLC5-6-like_sbd 73..620 CDD:382020 122/568 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.