DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and snf-12

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_509527.1 Gene:snf-12 / 181143 WormBaseID:WBGene00004911 Length:1022 Species:Caenorhabditis elegans


Alignment Length:630 Identity:126/630 - (20%)
Similarity:253/630 - (40%) Gaps:112/630 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KRGKWEKPTDYLFACFG--------LALKLDIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVV 75
            :|..|....|:..:|.|        :.....:::.....||       :||...::.:.:|::.:
 Worm   156 RRELWRTQKDFFLSCLGFMVGVGHTMRFPAKVYQHGGGVFF-------IPYLFSLIFFGLPLVFL 213

  Fly    76 HSFMGQFSSSGFIAAF-RLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFR-----PTL 134
            |..:||::......|| ||.|:..|:|:..:.:.....:||::.||..:.:...|.:     ..|
 Worm   214 HLSLGQYTGQAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIHYFFQSAKGLLLGDEL 278

  Fly   135 PW-SCEGLKSWHNRTDEYPTLCHPTIYKQHE--NYTLGVEAPSRLYFDYIRQDYFNTDKRFDISR 196
            || :|.......||      .|:  ::..|.  |.|..:.||...:...:..  .:|...|.:. 
 Worm   279 PWETCRDEWQLDNR------CCN--LHNLHSCFNSTNSITAPEAFFHSEVLS--LSTFGDFALG- 332

  Fly   197 PLIGLFTLSWALIAIIFYHFSEPAKFGKCIRYMVITTMV---LVVVCFVRFLFLPGSHK-LLWMY 257
            ||.....||.|...::.: |......|...:.|.:|..|   |:.:..:|.:.|||::| |.:::
 Worm   333 PLQSHLVLSLAAAWLLVF-FGVFKGLGSIAQTMNVTATVPYLLLSILLLRGISLPGANKGLTFLF 396

  Fly   258 ITPNTKDFSEGIYSTFIMALQAF---GAGWGSVIALSSFNGFKTDIMSYSWIISFGQIFI----- 314
            ...:||.:...|:.:  .|.|.|   |...|.:|::::|:.::.:|...|.::.......     
 Worm   397 TVDSTKLWKWQIWKS--AAEQVFYELGIDAGPLISMAAFSRYRNNIYRDSVLLVIMDALTSCLSG 459

  Fly   315 YIMFGLVSFMLEQYYKDISDTIVFHRIMNFWVLFLSSASALNTLGWPNLWTFIYYSMLLLASLTV 379
            .::|..|.|:..:...:::|.:....:   ::.|.......:.:.|..||..:::.||:||::..
 Worm   460 MVIFSFVGFIASESNSNVNDVLKHDPL---YLSFTVYPGVTSFMYWGGLWATLFFGMLVLAAIDA 521

  Fly   380 IATQLFTVLQSLFDEFEKLKERKQEVTFGIICGLAICSFF----FCTEHGSFYF-AILGIDVILA 439
            ....|..:..:..:.|..   :.:.|...::..|.:..||    .|.:.|.|.| ||..::....
 Worm   522 EFAWLEMIASAFMNHFSM---KNKAVENRLLAFLCLAGFFLGLPLCAQGGIFVFHAIENLNANWN 583

  Fly   440 HSLLHLLLLLVVLWIYGQKRFQRDIEFMLGQP-----------------FASWKVFI---LRYTA 484
            ...|.||.:.:|.::||...:..||..||..|                 |....::|   |.:..
 Worm   584 SFSLALLSVAIVCYVYGIDNYLTDISAMLRVPRIQISKATRLKEKLIYFFGPGGIYIKFSLCFIC 648

  Fly   485 PIVFLICMILGIIECIRVHFFFKEV---FLVLGIILVVLPFLAIPGYGFYYLRQ--SPGTFLERL 544
            |::..:.::..::...|:.|..:.:   :.::..|:::.|.|.:|...|..:||  :.|..|:.|
 Worm   649 PVILTVLLVASVLGYQRISFAGRPIPIDYEIVAWIVMIGPLLVVPLVAFMQIRQIRNEGKLLKSL 713

  Fly   545 ----------KRSCRPTDWY----------------PVEMKHRQH 563
                      ..|..|.|.|                |....||::
 Worm   714 FDTSEWRESQDDSLEPKDLYMRQSGKFESPPNRRRTPTIFTHREN 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 105/522 (20%)
snf-12NP_509527.1 SLC6sbd 158..660 CDD:271359 106/528 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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