DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and snf-2

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_492396.2 Gene:snf-2 / 172701 WormBaseID:WBGene00004901 Length:746 Species:Caenorhabditis elegans


Alignment Length:653 Identity:146/653 - (22%)
Similarity:262/653 - (40%) Gaps:133/653 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LFACFGLALKLDIFEVSYWFFFNIGFVG-----MLPYFLYMVIYLVPILVVHSFMGQFSSSGFIA 89
            |.:..|.|:.|.    :.|.|..:.:..     ::.|.:...::.||.:.:...:||:::....|
 Worm   118 LLSSLGQAIGLG----NIWRFPTVAYQNGGTSFLIVYIICAFVFAVPAIHMEFALGQYAAKSPPA 178

  Fly    90 AF-RLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSF------RPTLPWS---------- 137
            .| |:.|..:|:|:::..:.....:||.:.::..:|::||.|      |...||:          
 Worm   179 VFRRIMPALEGVGWMTCIVGAVIGVYYMILISWIVLYIINIFYVNNMGRCDNPWNQNNCYDGSEQ 243

  Fly   138 --C-EGLKSWHNRTDEYPTLCHPT------------IY---KQHENYTLGVEAPSRLYF--DYIR 182
              | :||.|  |.|....:..:.|            :|   |..:...:.||..:..:|  ..||
 Worm   244 SRCNKGLYS--NMTANASSFLNTTMAPLMSSGSKRILYINGKCQDATNMSVEVGTEQFFSKSVIR 306

  Fly   183 QDYFNTDKRFDISRPLIGLFTLSWALIAIIFYHFSEPAKFGKCIRYMVITTMVLVVVCFVRFLFL 247
            .....||.. .|:.|::|...|.|.:.|::.....:  ..||.....||....::|...:..:.|
 Worm   307 PSAGFTDFN-SINLPILGAVALCWVIAAVVLIRGMK--AIGKLSYVTVILPYFIIVSLLICGVSL 368

  Fly   248 PGSHKLLWMYITPNTKDFSEGIY--STFIMALQ----AFGAGWGSVIALSSFNGFKTDIMSYSW- 305
            ||:...|: ::...| ||:. :|  .|:..|||    :...|.|.::.::|:|. ||    |:| 
 Worm   369 PGAKDGLY-HLFGQT-DFNY-LYKRETWTAALQQICFSLSIGQGGLMNIASYNK-KT----YNWY 425

  Fly   306 ----IISFGQIFIYIMFGLVSFM---LEQYYKDISDTIV--FHRIM--NFWVLFLSSASALNTLG 359
                ||.|....:.|:.|:..|.   ...|.:.|:.|.:  |:.|:  ...:.|:....|:..:.
 Worm   426 RDVYIIVFLDTLMSILGGITVFSTLGFLAYERGINSTDIDAFNHIVKEGHALAFIVYTEAIAEMP 490

  Fly   360 WPNLWTFIYYSMLLLASLTVIATQLFTVLQSLFDEFEKLKERKQEVTFGIICGLAICSFFFCTEH 424
            .|.||..:::.||.|..::.....:..|...|.|.|..|:||:......:.....:......|:.
 Worm   491 VPYLWYALFFIMLFLLGISTEVVIVEIVCSCLADRFRYLRERRWLTVLSVSAVFFLLGLVMTTDA 555

  Fly   425 GSFYFAIL-----GIDVILAHSLLHLLLLLVVLWIYGQKRFQRDIEFMLGQPFASWK-------- 476
            |.::|.:.     ||......:    ::.:.|.|.||...|:.||..|.|:| .||.        
 Worm   556 GFYWFDMFDEYSTGISATFGTA----IMCMTVFWCYGTNHFREDIAVMWGEP-ESWLATCLGPAA 615

  Fly   477 ---VFILRYTAPIVFLICMILGIIECIRVH----FFFKEVFLVLGIILVVLPFLAIPGY------ 528
               ..|.::..|:..|:.|.|.|.|....|    ..:..||..||..:.|:|||.|||:      
 Worm   616 YFWTLIWKFVTPVCSLLMMGLWIWEKKYPHKGDGKIYPPVFDALGWFIAVVPFLVIPGFAIAAVI 680

  Fly   529 -----------GFYYLRQSPGTFLERLKRSCRPTDWYPVEMKHRQHYGDRVGNIEMTD---HLFN 579
                       .|...:|.|.  .:|:....  .:|       ::..||::...|..|   ::.:
 Worm   681 NTRRMNIPIRGAFMLQKQHPS--YDRISEQW--PEW-------KKAIGDKLPEQEPGDDDLNMID 734

  Fly   580 GIE 582
            |:|
 Worm   735 GLE 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 121/541 (22%)
snf-2NP_492396.2 SLC6sbd 113..638 CDD:271359 121/541 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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