DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33296 and snf-2

DIOPT Version :10

Sequence 1:NP_995644.2 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_492396.2 Gene:snf-2 / 172701 WormBaseID:WBGene00004901 Length:746 Species:Caenorhabditis elegans


Alignment Length:653 Identity:146/653 - (22%)
Similarity:262/653 - (40%) Gaps:133/653 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LFACFGLALKLDIFEVSYWFFFNIGFVG-----MLPYFLYMVIYLVPILVVHSFMGQFSSSGFIA 89
            |.:..|.|:.|.    :.|.|..:.:..     ::.|.:...::.||.:.:...:||:::....|
 Worm   118 LLSSLGQAIGLG----NIWRFPTVAYQNGGTSFLIVYIICAFVFAVPAIHMEFALGQYAAKSPPA 178

  Fly    90 AF-RLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSF------RPTLPWS---------- 137
            .| |:.|..:|:|:::..:.....:||.:.::..:|::||.|      |...||:          
 Worm   179 VFRRIMPALEGVGWMTCIVGAVIGVYYMILISWIVLYIINIFYVNNMGRCDNPWNQNNCYDGSEQ 243

  Fly   138 --C-EGLKSWHNRTDEYPTLCHPT------------IY---KQHENYTLGVEAPSRLYF--DYIR 182
              | :||.|  |.|....:..:.|            :|   |..:...:.||..:..:|  ..||
 Worm   244 SRCNKGLYS--NMTANASSFLNTTMAPLMSSGSKRILYINGKCQDATNMSVEVGTEQFFSKSVIR 306

  Fly   183 QDYFNTDKRFDISRPLIGLFTLSWALIAIIFYHFSEPAKFGKCIRYMVITTMVLVVVCFVRFLFL 247
            .....||.. .|:.|::|...|.|.:.|::.....:  ..||.....||....::|...:..:.|
 Worm   307 PSAGFTDFN-SINLPILGAVALCWVIAAVVLIRGMK--AIGKLSYVTVILPYFIIVSLLICGVSL 368

  Fly   248 PGSHKLLWMYITPNTKDFSEGIY--STFIMALQ----AFGAGWGSVIALSSFNGFKTDIMSYSW- 305
            ||:...|: ::...| ||:. :|  .|:..|||    :...|.|.::.::|:|. ||    |:| 
 Worm   369 PGAKDGLY-HLFGQT-DFNY-LYKRETWTAALQQICFSLSIGQGGLMNIASYNK-KT----YNWY 425

  Fly   306 ----IISFGQIFIYIMFGLVSFM---LEQYYKDISDTIV--FHRIM--NFWVLFLSSASALNTLG 359
                ||.|....:.|:.|:..|.   ...|.:.|:.|.:  |:.|:  ...:.|:....|:..:.
 Worm   426 RDVYIIVFLDTLMSILGGITVFSTLGFLAYERGINSTDIDAFNHIVKEGHALAFIVYTEAIAEMP 490

  Fly   360 WPNLWTFIYYSMLLLASLTVIATQLFTVLQSLFDEFEKLKERKQEVTFGIICGLAICSFFFCTEH 424
            .|.||..:::.||.|..::.....:..|...|.|.|..|:||:......:.....:......|:.
 Worm   491 VPYLWYALFFIMLFLLGISTEVVIVEIVCSCLADRFRYLRERRWLTVLSVSAVFFLLGLVMTTDA 555

  Fly   425 GSFYFAIL-----GIDVILAHSLLHLLLLLVVLWIYGQKRFQRDIEFMLGQPFASWK-------- 476
            |.::|.:.     ||......:    ::.:.|.|.||...|:.||..|.|:| .||.        
 Worm   556 GFYWFDMFDEYSTGISATFGTA----IMCMTVFWCYGTNHFREDIAVMWGEP-ESWLATCLGPAA 615

  Fly   477 ---VFILRYTAPIVFLICMILGIIECIRVH----FFFKEVFLVLGIILVVLPFLAIPGY------ 528
               ..|.::..|:..|:.|.|.|.|....|    ..:..||..||..:.|:|||.|||:      
 Worm   616 YFWTLIWKFVTPVCSLLMMGLWIWEKKYPHKGDGKIYPPVFDALGWFIAVVPFLVIPGFAIAAVI 680

  Fly   529 -----------GFYYLRQSPGTFLERLKRSCRPTDWYPVEMKHRQHYGDRVGNIEMTD---HLFN 579
                       .|...:|.|.  .:|:....  .:|       ::..||::...|..|   ::.:
 Worm   681 NTRRMNIPIRGAFMLQKQHPS--YDRISEQW--PEW-------KKAIGDKLPEQEPGDDDLNMID 734

  Fly   580 GIE 582
            |:|
 Worm   735 GLE 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_995644.2 SLC5-6-like_sbd 27..496 CDD:271356 121/541 (22%)
snf-2NP_492396.2 rplD 5..>122 CDD:184900 1/3 (33%)
SLC6sbd 113..638 CDD:271359 121/541 (22%)

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