DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33296 and snf-1

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_491491.2 Gene:snf-1 / 172119 WormBaseID:WBGene00004900 Length:617 Species:Caenorhabditis elegans


Alignment Length:565 Identity:124/565 - (21%)
Similarity:218/565 - (38%) Gaps:114/565 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YLFACFG-LALKLDIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVVHSFMGQFSSSGFIAAF- 91
            ||||... |.|...|.|       |.|......|.:.:.:..:|.:|:...:||.:....:.|| 
 Worm    37 YLFAMTNFLNLPKLILE-------NGGVAFAAAYAIVVGVLCMPTMVMEMSIGQVTGRAPVLAFY 94

  Fly    92 RLAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSF------RPTLPW-SCEGLKSW----- 144
            .|.|:|:|:|...|..|...|...:.|::...|||...|      |..||| :|:....:     
 Worm    95 HLFPVFRGIGVSQILFTMVVLACMTKFLSTLCLFLYYYFWTFHAGRSGLPWLNCKAFPEFVSQPC 159

  Fly   145 ------------HNRTDEYPTLCHPTIYKQHE--NYTLGVEAPSRLYFDYIRQDYFNTDKRFDIS 195
                        :||.:        ||..:..  .:...:|.||....|:           .|..
 Worm   160 REAGSITNITQINNRLN--------TIQAESSMMQFLTTLERPSESIADF-----------KDFQ 205

  Fly   196 RPLIGLFTLSW--ALIAIIFYHFSEPAKF-GKCIRYMVITTMVLVVVCFVRFLFLPGSHKLLWMY 257
            .|::......|  ..:||.|     ..:| ||.:.::::.....::|.|:|...|.|..::|.:|
 Worm   206 YPILIAQGAIWIAIFVAICF-----GVRFVGKTVAFVLMLAFSSLLVFFLRSATLGGVTEILEIY 265

  Fly   258 ITPNTKDFSE-GIYSTFIMALQ----AFGAGWGSVIALSSF----NGFKTDIMSYS-W--IISFG 310
            .  ...|:.: ..|..:.:|::    ..|.|:|:.|.:||:    |....|.:..| |  ||||.
 Worm   266 W--KATDWEKLADYQVWRLAIEQAILGTGIGYGAFITMSSYMKRSNNLVCDSIFLSVWHLIISFV 328

  Fly   311 Q-IFIYIMFGLVSFMLEQYYKDISDTIVFHRIMNFWVLFLSSASALNTLGWPNLWTFIYYSMLLL 374
            | :.|..:.|.:|..|..:..::.:|    .....|.: |:..|.|     |.||:.:..::.:.
 Worm   329 QTMSIICIVGYLSMKLGIHPTELLET----GEDQMWYM-LAYVSYL-----PKLWSGVLLTICIC 383

  Fly   375 ASLTVIATQLFTVLQSLFDEFEKLKERKQEVTFGIICGLAICSF------FFCTEHGSFYFAILG 433
            ...:||.....:||.:..|.|   .|...:........|.:|.|      :|.|..|...:.:..
 Worm   384 TMFSVITILALSVLSTFEDAF---GENWSKCCRRFFLALFVCLFCFGLTVYFATNAGRHAYELAT 445

  Fly   434 IDVILAHSLLHLLL---LLVVLWIYGQKRFQRDIEFMLGQPFAS-WKVFILRYT--APIVFLICM 492
            ..:  .:..::.:|   |....|.|...:..:|:..|:.....| :..|.|.:|  .||:.....
 Worm   446 RSI--KYCTIYFILTAELFATAWFYCAHKLGKDLHNMMRSRCCSCFGHFFLYFTYLLPILPAGVA 508

  Fly   493 ILGIIE------CIRVH-FFFKEVFLVLGIILVVLPFLAIPGYGF 530
            .|..::      ...:| :.:.|   .:||.:.::|.:.||.|.|
 Worm   509 FLNALDYKFSSFSAPIHEWKYSE---YVGIAIAMVPLIPIPLYFF 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 115/522 (22%)
snf-1NP_491491.2 SNF 21..554 CDD:264495 124/565 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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