DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33296 and Slc6a12

DIOPT Version :9

Sequence 1:NP_001285711.1 Gene:CG33296 / 2768941 FlyBaseID:FBgn0053296 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001368835.1 Gene:Slc6a12 / 14411 MGIID:95628 Length:628 Species:Mus musculus


Alignment Length:594 Identity:126/594 - (21%)
Similarity:245/594 - (41%) Gaps:107/594 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGKWEKPTDYLFACFGLALKL-DIFEVSYWFFFNIGFVGMLPYFLYMVIYLVPILVVHSFMGQFS 83
            ||:|....:::.:..|..:.| :::...|..:.|.|....:|||::.....:|:..:...:||:|
Mouse    50 RGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQYS 114

  Fly    84 SSGFIAAFR-LAPLFKGMGYVSIFLTFTTLIYYSMFVAIPLLFLINSFRPTLPW-SCEGLKSWHN 146
            |.|.:.|:| :.||.:|:|..|:.:.....|||.:.:|..|.:|.:||...||| :|  ..||:.
Mouse   115 SQGSVTAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTC--TNSWNT 177

  Fly   147 RTDEYPTLCHPTIYKQH---------ENYTLGVEAPSRLYFDYIRQDYFNTDKRFDISRPLIGLF 202
            .        |...:..|         ||:|    :|...:::         .:...|:..:..|.
Mouse   178 E--------HCVDFLNHSSARGVSSSENFT----SPVMEFWE---------RRVLGITSGIHDLG 221

  Fly   203 TLSW-----ALIAIIFYHF---SEPAKFGKCIRYMVITTMVLVVVCFVRFLFLPGSHKLLWMYIT 259
            :|.|     .|:|.|..:|   ......||.:.:......:::::..:|.:.|||:::.:..|:.
Mouse   222 SLRWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIILLIRGVTLPGAYQGIVFYLK 286

  Fly   260 PNT---------KDFSEGIYSTFIMALQAFGAGWGSVIALSSFNGFKTDIMSYSWIISF---GQI 312
            |:.         .|....|:.:|.:.       .|.:.||.|:|.:..:....|..:.|   ...
Mouse   287 PDLLRLKDPQVWMDAGTQIFFSFAIC-------QGCLTALGSYNKYHNNCYRDSIALCFLNSATS 344

  Fly   313 FI--YIMFGLVSFMLEQYYKDISDTIVFHRIMNFWVLFLSSASALNTLGWPNLWTFIYYSMLL-- 373
            |:  :::|.::.||.::....||:...    ....:.|::...|:..:....||:.:::.|||  
Mouse   345 FVAGFVVFSILGFMSQEQGIPISEVAE----SGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLLFL 405

  Fly   374 -LASLTVIATQLFTVLQSLFDEFEKLKERKQEVTFGIICGLAICSFFFCTEHGSF------YFAI 431
             |.|..|....|.|....:|.:..:...|::.:...|.....:......||.|.:      |:|.
Mouse   406 GLDSQFVCMECLVTASMDMFPQQLRKSGRRELLILAISVLCYLMGLLLVTEGGMYIFQLFDYYAS 470

  Fly   432 LGIDVILAHSLLHLLLLLVVLWIYGQKRFQRDIEFMLGQPFASWKVFILRYTAPIVFLICMILGI 496
            .||.::    .|.|..::.:.|:||..||..::|.|:|  :..|         |:|.:..:.|..
Mouse   471 SGICLL----FLSLFEVICIGWVYGADRFYDNVEDMIG--YRPW---------PLVKISWLFLTP 520

  Fly   497 IECIRVHFF---------FKEVFLV------LGIILVVLPFLAIPGYGFYYLRQSPGTFLERLKR 546
            ..|:...||         :..|::.      :|.:|.......:|.:......::.|:|.:||:|
Mouse   521 GLCLATFFFSLSKYTPLKYNNVYMYPSWGYSIGWLLAFSSMACVPLFIIITFLKTQGSFKKRLRR 585

  Fly   547 SCRPTDWYP 555
            ...|....|
Mouse   586 LITPDPSLP 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33296NP_001285711.1 SLC5-6-like_sbd 27..496 CDD:271356 109/511 (21%)
Slc6a12NP_001368835.1 SLC5-6-like_sbd 49..589 CDD:382020 124/587 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.