DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33281 and TMT2

DIOPT Version :9

Sequence 1:NP_995620.1 Gene:CG33281 / 2768938 FlyBaseID:FBgn0053281 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001190923.1 Gene:TMT2 / 829684 AraportID:AT4G35300 Length:739 Species:Arabidopsis thaliana


Alignment Length:739 Identity:123/739 - (16%)
Similarity:216/739 - (29%) Gaps:309/739 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AISVNIISISYGAFCGWPSSSFL--------ELSSENSPLDTGPLTPTDQGWVASNICLGGLVGT 70
            |:.|.|.:.......||.:::..        |.:.|::        |:.:|.:.:...:|..:.|
plant     4 AVLVAIAAAVGNLLQGWDNATIAGAVLYIKKEFNLESN--------PSVEGLIVAMSLIGATLIT 60

  Fly    71 FLFTWLADRIGRKLCLMWMALPNLLGWVIIPFARTPMHLIIARFIGGAAGGGCFTVIPIYIAELA 135
            .....:||.:||:..|:..::...:|.:::.::.....|::.|.:.|...|...|::||||:|.|
plant    61 TCSGGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVPIYISETA 125

  Fly   136 SDNIRGIL----------GVFLVLTCNFGLVL------AFVLGYYFNYAQVSWIVSSLSFVFVGC 184
            ...|||:|          |:||.....||:.|      ..:||..|        :.||.|.|:..
plant   126 PPEIRGLLNTLPQFTGSGGMFLSYCMVFGMSLMPSPSWRLMLGVLF--------IPSLVFFFLTV 182

  Fly   185 FWFMPETPQHLAKINKIEEAEHSLRYYRNIKS-------------------------NPAKELSE 224
            | |:||:|:.|....::.||:..|:..|..:.                         .||.|:::
plant   183 F-FLPESPRWLVSKGRMLEAKRVLQRLRGREDVSGEMALLVEGLGIGGETTIEEYIIGPADEVTD 246

  Fly   225 ELQLELQK--------------------------------------------------------- 232
            :..:.:.|                                                         
plant   247 DHDIAVDKDQIKLYGAEEGLSWVARPVKGGSTMSVLSRHGSTMSRRQGSLIDPLVTLFGSVHEKM 311

  Fly   233 ----------------------------------------------------------------- 232
                                                                             
plant   312 PDTGSMRSALFPHFGSMFSVGGNQPRHEDWDEENLVGEGEDYPSDHGDDSEDDLHSPLISRQTTS 376

  Fly   233 ------------------------------------------LKTTEKTTADG------------ 243
                                                      .|.||:....|            
plant   377 MEKDMPHTAHGTLSTFRHGSQVQGAQGEGAGSMGIGGGWQVAWKWTEREDESGQKEGGFKRIYLH 441

  Fly   244 -----------------------------------------------------VDDDDAATGVTW 255
                                                                 |...:...|..|
plant   442 QEGFPGSRRGSIVSLPGGDGTGEADFVQASALVSQPALYSKDLLKEHTIGPAMVHPSETTKGSIW 506

  Fly   256 SDFAEGKTRKAFLIGLGLISFNQLCGCFAMLNYTAVIFEQAG-----------SSLPPTVAAIIV 309
            .|..:...::|.::|:||....|..|...:|.||..|.||||           ||....:.:.:.
plant   507 HDLHDPGVKRALVVGVGLQILQQFSGINGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALT 571

  Fly   310 GVIQLMGTYASTVLVERLGRKILLLVSAVGIGLGQSAMGTYSYFQMLGCPVASFSWVPIAGFSFM 374
            ..:.|.....:..|::..||:.|||.:...:......:...:...|.....|..|.|.:..: |.
plant   572 TFVMLPAIAVAMRLMDLSGRRTLLLTTIPILIASLLVLVISNLVHMNSIVHAVLSTVSVVLY-FC 635

  Fly   375 LFLAAVGLLSLPFLVVSEIMPQKIRSTAIMILMSTLWLISTCAVKLMPVFTESLGMHGTVFMFAS 439
            .|:...|  ..|.::.|||.|.::|...|.|...|.|:........:||..:|:|:.|...|:|.
plant   636 FFVMGFG--PAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAI 698

  Fly   440 LSFLAAIFIAIFVPETKGKSVDAI 463
            :..::.:|:.|.||||||..::.|
plant   699 VCCISWVFVFIKVPETKGMPLEVI 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33281NP_995620.1 MFS 50..452 CDD:119392 109/682 (16%)
TMT2NP_001190923.1 MFS 14..>174 CDD:421695 38/175 (22%)
MFS <516..713 CDD:421695 50/199 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

Return to query results.
Submit another query.