DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18420 and CG34409

DIOPT Version :9

Sequence 1:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001097728.2 Gene:CG34409 / 5740854 FlyBaseID:FBgn0085438 Length:511 Species:Drosophila melanogaster


Alignment Length:284 Identity:79/284 - (27%)
Similarity:119/284 - (41%) Gaps:52/284 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGTRSPLKLGPRIVNGKVAVRNSSPWM---AFLHTSSNQ--FICGGTLISRRLVLTAAHCFIPNT 90
            ||    :.:..|::.|..|.....||:   |:.:.||::  |.|.|:|||...::|||||.:...
  Fly   242 CG----INVESRLLGGDQASAGQFPWLTRIAYRNRSSSRISFRCSGSLISSNHIVTAAHCVVNLV 302

  Fly    91 TIV----VRLGEYNRKLKGYREEHQVNRTFQHRFYDPNTHANDIALLRLVSNVVYKANIRPICIM 151
            :.:    ||||..:.     .....:.:...|..||...:||||||||:.|.   .....|||:.
  Fly   303 SDLELSHVRLGSQDG-----ATPFAIEQVIVHPNYDQPKYANDIALLRINST---NGTFTPICLP 359

  Fly   152 WDAS---WKHHIDSIKVLTGTGWGRTE---SMHDSSELRTLDISRQP---SKMCAFG-------- 199
            ::..   ....|..|.|..|...|.||   ||..|:....:...|.|   :..||..        
  Fly   360 FNGPITLGNRLIGQIGVAAGWSIGSTENNSSMDPSNSTAGVRFIRLPIVNTTSCAIAYASLSENF 424

  Fly   200 ----SVLSNQFCA-GNWNSNLCIGDTGGPV---GAMVRYRNAFRFVQVGI-AITNKRC---QRPS 252
                .:..|..|| |...:::|.||:|||.   |....:..:.|:..:|| |.....|   ..|.
  Fly   425 QQPIVITPNHLCAQGMPMNDVCRGDSGGPFMDDGTSGVFGTSGRYTIIGIVAFGPTLCGVTTIPG 489

  Fly   253 VFTDVMSHIEFIRRIFLTQNGNDR 276
            |:|.|.|..::|.|..  ..|:|:
  Fly   490 VYTLVSSFSDWILRSI--AEGSDQ 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 73/259 (28%)
Tryp_SPc 43..267 CDD:238113 73/261 (28%)
CG34409NP_001097728.2 CLIP 26..71 CDD:288855
Tryp_SPc 249..501 CDD:214473 73/259 (28%)
Tryp_SPc 252..501 CDD:238113 72/256 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463626
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.