DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18420 and Jon99Cii

DIOPT Version :10

Sequence 1:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster


Alignment Length:265 Identity:67/265 - (25%)
Similarity:104/265 - (39%) Gaps:63/265 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TRSPLK-LGPRIVNGKVAVRNSSPWMAFLHTSSN-QFICGGTLISRRLVLTAAHCFIPNTTIVVR 95
            |.:|:| :..||.||..|.....|::..|..|.| .:.|||::|....|||||||....:.:.:.
  Fly    25 TPTPIKDIQGRITNGYPAYEGKVPYIVGLLFSGNGNWWCGGSIIGNTWVLTAAHCTNGASGVTIN 89

  Fly    96 LGEYNRKLKGYREEHQVNRTFQHRFYDPNTHANDIALLR--------LVSNV---VYKANIRPIC 149
            .|...|....|..........||..|:.....|||:|:|        ||:.|   .|....:...
  Fly    90 YGASIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISLIRTPHVDFWSLVNKVELPSYNDRYQDYA 154

  Fly   150 IMWDASWKHHIDSIKVLTGTGWGRTESMHDSSE----LRTLDISRQPSKMCAFGSVLSNQFCAGN 210
            ..|             ...:|||.|   :|.|.    |:::|:           .::|...|:..
  Fly   155 GWW-------------AVASGWGGT---YDGSPLPDWLQSVDV-----------QIISQSDCSRT 192

  Fly   211 WN-------------SNLCIGDTGGPVGAMVRYRNAFRFVQVGIAITNKRCQ--RPSVFTDVMSH 260
            |:             .:.|.||:|||:..    .:..|.|.|....:...||  .|:||:.|..:
  Fly   193 WSLHDNMICINTDGGKSTCGGDSGGPLVT----HDGNRLVGVTSFGSAAGCQSGAPAVFSRVTGY 253

  Fly   261 IEFIR 265
            :::||
  Fly   254 LDWIR 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 62/252 (25%)
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 63/254 (25%)

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