DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18420 and CG8870

DIOPT Version :10

Sequence 1:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_731802.1 Gene:CG8870 / 41645 FlyBaseID:FBgn0038144 Length:356 Species:Drosophila melanogaster


Alignment Length:273 Identity:78/273 - (28%)
Similarity:116/273 - (42%) Gaps:49/273 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CG--TRSPLKLGPRIVNGKVAVRNSSPWMAFL-----HTSSNQFI--CGGTLISRRLVLTAAHCF 86
            ||  .|.|.|       ||:...|..||||.|     :..|.:.:  |||:||:...|||||||.
  Fly    77 CGQSRRKPTK-------GKIPALNEFPWMAMLLYGNKNNLSQKLVPKCGGSLINNWYVLTAAHCV 134

  Fly    87 ------IPNTTIVVRLGEYNRK-------LKGYRE------EHQVNRTFQHRFYDPNTH-ANDIA 131
                  .|.....|||||:|..       :.|.|:      |.:|::...|..::.... .||||
  Fly   135 EYPFMDYPYALKTVRLGEHNTSTNPDRAIVNGRRQYAPLYMEIEVDQIITHEQFNRGRRLINDIA 199

  Fly   132 LLRLVSNVVYKANIRPICIMWDASWKHHIDSIKVLTGTGW-GRTESMHDSSELRTLDISRQPSKM 195
            |:||...|.|...|:|||:........|   .:....:|| ...:.:.....||:....|.|. :
  Fly   200 LVRLKFPVRYTRAIQPICLPRAQKLAAH---KRKFQASGWPDMGQGIASEVLLRSFIAERHPD-V 260

  Fly   196 CA--FGSVLSNQFCAGNWNSN-LCIGDTGGP-VGAMVRYRNAFRFVQVGIAITNKRCQ----RPS 252
            |.  :...|.:|.|||..:.| ...||:||| :..::|.:....:....|:...|.|.    :|:
  Fly   261 CKSNYDFNLGSQICAGGLDGNDTSPGDSGGPLMETVIRGKVTLTYAAGIISYGQKPCVLKTCKPA 325

  Fly   253 VFTDVMSHIEFIR 265
            .:|......|:|:
  Fly   326 FYTKTSYFFEWIK 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 72/257 (28%)
CG8870NP_731802.1 Tryp_SPc 93..340 CDD:238113 71/250 (28%)

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