DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18420 and snk

DIOPT Version :10

Sequence 1:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:281 Identity:86/281 - (30%)
Similarity:123/281 - (43%) Gaps:53/281 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FLDSECGTRSPLKLGPRIVNGKVAVRNSSPWMAFL-----HTSSNQFI---CGGTLISRRLVLTA 82
            |...:|....||     ||.|........|.||.|     ..|.:|.|   |||.|:|...||||
  Fly   174 FSGKQCVPSVPL-----IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTA 233

  Fly    83 AHCFIPNT--TIVVRLGEYNRKLKGYREEHQVNRTFQ---------HRFYDPNTHANDIALLRLV 136
            |||....:  ..:||||.        |:.::.:.|.|         |..|..:.:.:|||||:|.
  Fly   234 AHCATSGSKPPDMVRLGA--------RQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLT 290

  Fly   137 SNVVYKANIRPICIMWDASWKHHIDSIKVLTGTGWGRTESM-HDSSELRTLDISRQPSKMCAF-- 198
            ..|.:...:||.|:     |:.....|..:...||||||.: ..|:.||.:|:...|...|..  
  Fly   291 RRVKFSEQVRPACL-----WQLPELQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIY 350

  Fly   199 -------GSVLSNQFCAG--NWNSNLCIGDTGGPVGAMVRYRNAFRFVQVGIAITNKRC---QRP 251
                   ..::..|||||  ....:.|.||:|||:.|::...|...|| |||....|.|   ..|
  Fly   351 RKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFV-VGITSFGKFCAAPNAP 414

  Fly   252 SVFTDVMSHIEFIRRIFLTQN 272
            .|:|.:.|::::|.:|...|:
  Fly   415 GVYTRLYSYLDWIEKIAFKQH 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 79/255 (31%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 80/257 (31%)
Blue background indicates that the domain is not in the aligned region.

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