DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18420 and CG3088

DIOPT Version :10

Sequence 1:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster


Alignment Length:285 Identity:63/285 - (22%)
Similarity:111/285 - (38%) Gaps:73/285 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLTVFPLLGSTQFL------DSECGTRSPLKLGPRIVNGKVAVRNSSPWMAFLHTSSNQFICGGT 72
            ||.||  ||.|...      |||    .|..:   |.||..|....:|::..:....:...|.||
  Fly     3 LLVVF--LGLTLVAAGSAKKDSE----DPDHI---ITNGSPAYEGQAPYVVGMAFGQSNIWCSGT 58

  Fly    73 LISRRLVLTAAHCFIPNTTIVVRLGEYNRKLKGYREEHQVNRTFQHRF---------YDPNTHAN 128
            :|....:||:|.|...::.:.:..|              ..|..|.:|         ...|.|  
  Fly    59 IIGDTWILTSAQCLTGSSGVTIYFG--------------ATRLSQAQFTVTVGTSEYVTGNQH-- 107

  Fly   129 DIALLRL----VSNVVYKA---NIRPICIMWDASWKHHIDSIKVLTGTGWGRTESMHDSSE-LRT 185
             :||:|:    .||.|.:.   ::|.....::..|.:         ..|||.|...:..:: |:.
  Fly   108 -LALVRVPRVGFSNRVNRVALPSLRNRSQRYENWWAN---------VCGWGVTTFSNGLTDALQC 162

  Fly   186 LDISRQPSKMCA--FGS-VLSNQFCAGNWNS--NLCIGDTGGPVGAMVRYRNAFRFVQVGIA--I 243
            :|:....:..|.  :|| .:|:|.......|  :.|.||.|.|   ::..:::   ..|||:  :
  Fly   163 VDLQIMSNNECIAFYGSTTVSDQILCTRTPSGRSTCFGDAGSP---LITKQDS---TVVGISAFV 221

  Fly   244 TNKRCQ--RPSVFTDVMSHIEFIRR 266
            .:..|.  .|:.|..:.|.:::|.:
  Fly   222 ASNGCTLGLPAGFARITSALDWIHQ 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 51/247 (21%)
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 51/246 (21%)

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