DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18420 and Jon65Aii

DIOPT Version :9

Sequence 1:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_648014.1 Gene:Jon65Aii / 38684 FlyBaseID:FBgn0035666 Length:259 Species:Drosophila melanogaster


Alignment Length:289 Identity:79/289 - (27%)
Similarity:122/289 - (42%) Gaps:67/289 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VIGMASILLLLTVFPLLGSTQ----FLDSECGTRSPLKLGPRIVNGKVAVRNSSPWMAFLHTSSN 65
            |:|    :||.:.|.|:.:.:    ..|...|.    |:..||.||..|.....|::..|...:.
  Fly     3 VLG----VLLFSAFALVAALERPVPVKDMPAGN----KINGRITNGYPAYEGKVPYIVALRFDNG 59

  Fly    66 Q---FICGGTLISRRLVLTAAHCFIPNTTIVVRLGEYNRKLKGYREEHQVNRTFQHRFYDPNTHA 127
            .   :.|||::|....|||||||....:.:.:..|..      :|::.|    |.|  ||.....
  Fly    60 NGGGWYCGGSIIGHEWVLTAAHCTYGASYVTISYGAV------WRQQPQ----FTH--YDTGNLH 112

  Fly   128 NDIALLRLVS----NVVYKANIRPICIMWDASWKHHIDSIKVLTGTGWGRTESMHDSS----ELR 184
            |||||:|...    ::|.|..:.    .:|..:.:......:|  :|||   |..|||    .|.
  Fly   113 NDIALIRTPHVDFWSLVNKVELP----RYDDRYNNFYGWWALL--SGWG---SSSDSSGMTDYLN 168

  Fly   185 TLDISRQPSKMCA--FGS--VLSNQFC-AGNWNSNLCIGDTGGPVGAMVRYRNAFRFVQVGI--- 241
            .:||....:.:|.  :||  :.||..| |...|...|.||:|||:  ::...|.    ||||   
  Fly   169 CVDIQISDNSVCLDYYGSHYITSNHLCYATPENKGSCSGDSGGPL--VLHDGNR----QVGIVSF 227

  Fly   242 -----AITNKRCQRPSVFTDVMSHIEFIR 265
                 .::|.    |...|.|..::::||
  Fly   228 GSAAGCLSNS----PKGLTRVTGYLDWIR 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 68/245 (28%)
Tryp_SPc 43..267 CDD:238113 69/247 (28%)
Jon65AiiNP_648014.1 Tryp_SPc 36..251 CDD:214473 68/245 (28%)
Tryp_SPc 37..254 CDD:238113 69/247 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435639
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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