DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18420 and Clipb4

DIOPT Version :10

Sequence 1:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster
Sequence 2:XP_061505120.1 Gene:Clipb4 / 3290783 VectorBaseID:AGAMI1_007833 Length:737 Species:Anopheles gambiae


Alignment Length:264 Identity:75/264 - (28%)
Similarity:125/264 - (47%) Gaps:36/264 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGTRSPLKLGPRIVNGKVAVRNSSPWMAFLH----TSSNQFICGGTLISRRLVLTAAHCF--IPN 89
            ||    :.|..|::.|:....:..||.|.:.    ..|..|.|||:||:.|.::|||||.  ||.
Mosquito   477 CG----IHLADRVIGGQPTQIDEFPWTALIEFQKPDGSFGFHCGGSLINDRYIVTAAHCIKSIPR 537

  Fly    90 TTIV--VRLGEY---------NRKLKGYREEHQVNRTFQHRFYD--PNTHANDIALLRLVSNVVY 141
            ...|  |||||:         |........:..:.:...|..||  ..::||||||:|....|.|
Mosquito   538 GWKVHRVRLGEWDLTSANDCQNEFCSDAPIDLDIEQIVVHTGYDTKDQSNANDIALIRFTRPVNY 602

  Fly   142 KANIRPICIMWDASWKHHIDSIKVLTGTGWGRTESMHDSSELRTLDISRQPSKMCA----FGSVL 202
            ...:||||:...:|.::...:.......|||:|||...|.:...::::.:..:.||    .|.:|
Mosquito   603 SQTVRPICLPLSSSLRNRNHAGMPAYAAGWGKTESATASEKKLKVEMNIKSLQECAPVYQRGGIL 667

  Fly   203 --SNQFCAGN-WNSNLCIGDTGGPVGAMVRYRNAFRFVQVGIAITNKRCQR---PSVFTDVMSHI 261
              ....|||. ...:.|.||:|||:  |.:...::..:.| ::...::|..   |.|:|:|..::
Mosquito   668 LKKTHMCAGGVRGKDTCSGDSGGPL--MRQMSGSWYLIGV-VSFGPQKCGAPGVPGVYTNVAEYV 729

  Fly   262 EFIR 265
            ::|:
Mosquito   730 DWIK 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 71/250 (28%)
Clipb4XP_061505120.1 None

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