DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18420 and Sp212

DIOPT Version :9

Sequence 1:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_996209.2 Gene:Sp212 / 2768666 FlyBaseID:FBgn0053329 Length:516 Species:Drosophila melanogaster


Alignment Length:282 Identity:82/282 - (29%)
Similarity:129/282 - (45%) Gaps:44/282 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLTVFPLLGSTQFLDSE-------CGTRSPLKLGPRIVNGKVAVRNSSPWMAFLH---TSSNQFI 68
            ::||.|.....|..|..       ||...  ...|.||.|....|...||::.::   ..:..|.
  Fly   243 VVTVPPATPPPQRFDPRSQISSVVCGREG--STTPFIVRGNEFPRGQYPWLSAVYHKEVRALAFK 305

  Fly    69 CGGTLISRRLVLTAAHCF--IPNTTIVVRLGEYNRKLKGYREE----HQVNRTFQHRFYDPNTHA 127
            |.|:|||..:|::||||.  :....:||.||.|:  |..|.|:    ..|.|...|..|:..:::
  Fly   306 CRGSLISSSIVISAAHCVHRMTEDRVVVGLGRYD--LDDYGEDGAEMRNVMRLLWHPDYNTRSYS 368

  Fly   128 N-DIALLRLVSNVVYKANIRPICIMWDASWKHHIDSIKVLTG--TGWGRTESMHDSSELRTLDIS 189
            : ||||:.:...|.:...|.||| ||.......:.:    ||  .||||.|....:...|.::..
  Fly   369 DADIALITIERPVTFNDIIAPIC-MWTVEASRTVST----TGFIAGWGRDEDSSRTQYPRVVEAE 428

  Fly   190 RQPSKMCAF---GSVLSNQ-FCAGNWN-SNLCIGDTGGPVGAMVRYRNAFRFVQVGIAITNKR-- 247
            .....:||.   |::::.: .||||.: |..|:||:||  |.||:..:  |::..||....:|  
  Fly   429 IASPTVCASTWRGTMVTERSLCAGNRDGSGPCVGDSGG--GLMVKQGD--RWLLRGIVSAGERGP 489

  Fly   248 ---CQ--RPSVFTDVMSHIEFI 264
               ||  :..::.|:..||.:|
  Fly   490 AGTCQLNQYVLYCDLSKHINWI 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 73/245 (30%)
Tryp_SPc 43..267 CDD:238113 74/246 (30%)
Sp212NP_996209.2 GD_N 23..122 CDD:292649
Tryp_SPc 277..514 CDD:238113 74/246 (30%)
Tryp_SPc 277..511 CDD:214473 73/244 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437296
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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