DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18420 and LOC100361261

DIOPT Version :9

Sequence 1:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster
Sequence 2:XP_038949773.1 Gene:LOC100361261 / 100361261 -ID:- Length:248 Species:Rattus norvegicus


Alignment Length:287 Identity:78/287 - (27%)
Similarity:119/287 - (41%) Gaps:64/287 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ILLLLTVFPLLGSTQFLDSECGTRSPLKLGPRIVNGKVAVRNSSPWMAFLH---TSSNQFICGGT 72
            :||||..|.|...|     :.|         .|:.|..|..:|.|:||:|.   .:|....|||.
  Rat     3 LLLLLQSFSLAPKT-----DAG---------EIIGGHEAKPHSRPYMAYLQIMDENSGNKTCGGF 53

  Fly    73 LISRRLVLTAAHCFIPNTTIVVRLGEYNRKLKGYREEHQV---NRTFQHRFYDPNTHANDIALLR 134
            ||....|||||||.  .:.|:|.||.:|  :|...::.||   .:...|..|:..|.:||:.||:
  Rat    54 LIREYFVLTAAHCL--GSXIIVTLGAHN--IKEQEKKQQVIPMVKIIPHPAYNAKTISNDLMLLK 114

  Fly   135 LVSNVVYKANIRPICIMWDASWKHHIDSIKVLTG-----TGWGRTESMHDSSE-LRTLDISRQPS 193
            |.......:.::.:.:        ...::||..|     .|||:...|....: |:.:::..|..
  Rat   115 LKIKAKKTSAVKTLNL--------PRSNVKVKPGDVCYVAGWGKLGPMGKFPDTLQEVELIVQED 171

  Fly   194 KMCAFGSVLSNQF------CAGNWNSNLCI--GDTGGPVGAMVRYRNAFRFVQVGIAITNKRCQ- 249
            :.|.  |.|:|.:      |||........  ||:|||:...          :|...|.:..|: 
  Rat   172 QKCE--SYLTNVYDKANEKCAGEPKIKHASFQGDSGGPLVCK----------KVAAGIVSYGCKD 224

  Fly   250 --RPSVFTDVMSHIEFIRRIFLTQNGN 274
              .|..||.|.:   |:.||..|...|
  Rat   225 GSTPRAFTKVST---FLSRIKKTMKKN 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 65/244 (27%)
Tryp_SPc 43..267 CDD:238113 66/246 (27%)
LOC100361261XP_038949773.1 Tryp_SPc 21..244 CDD:238113 68/249 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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