DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18636 and CG17477

DIOPT Version :9

Sequence 1:NP_995714.2 Gene:CG18636 / 2768923 FlyBaseID:FBgn0032551 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster


Alignment Length:312 Identity:70/312 - (22%)
Similarity:120/312 - (38%) Gaps:94/312 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FVGIILMFQLLHSGCSQFLDPACGIRTQSRTAYRIINGHTAKYNSSPWMVFLHSTTDMFVCGGSL 75
            |:..||:|..|:          |.:..   ..:.|:.|..|....:|:.|.|.:.....:|||::
  Fly     6 FLFYILVFSSLY----------CDLLA---LEHFIVGGQNAAEGDAPYQVSLQTLLGSHLCGGAI 57

  Fly    76 ITDKLVLTAAHCFIANQHLVARLGEYERTRSEECTG--YYCNFREEHMVDAGFKHKLYDPNTHAN 138
            |:|:.::||.||          :..|..:|.:..||  .|......:..||.:.|..||...:.|
  Fly    58 ISDRWIITAGHC----------VKGYPTSRLQVATGTIRYAEPGAVYYPDAIYLHCNYDSPKYQN 112

  Fly   139 DIAILRLSKSVVYRDNIRPICVVWDHRWRHYLDKIDLLTA-----------TGWGK--------- 183
            ||.:|.|::|:.:               ......::|.|:           ||||.         
  Fly   113 DIGLLHLNESITF---------------NALTQAVELPTSPFPRGASELVFTGWGSQSAAGSLPS 162

  Fly   184 -----TQMESDSDALQTL-----DIRRQPPDVCAKFIGQTIAGNQFCAGNWDSNLCNGDSGGPLG 238
                 .|...:|.|.:::     |:...|..:||  ..|...|           .|:||||||| 
  Fly   163 QLQRVQQQHLNSPACESMMSAYEDLELGPCHICA--YRQANIG-----------ACHGDSGGPL- 213

  Fly   239 AVITHKNTQRFVQVGIASYTNRNCQKA-SVFTDVLSHAEFILRVWRMYGKGQ 289
               .|:.|    .|||.::.....|.. .:|.:::.:.:::.:.  |.|.|:
  Fly   214 ---VHQGT----LVGILNFFVPCAQGVPDIFMNIMYYRDWMRQT--MSGNGK 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18636NP_995714.2 Tryp_SPc 44..278 CDD:214473 61/266 (23%)
Tryp_SPc 45..278 CDD:238113 61/265 (23%)
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 61/268 (23%)
Tryp_SPc 27..246 CDD:214473 61/264 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.