DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18636 and Gzmb

DIOPT Version :10

Sequence 1:NP_995714.2 Gene:CG18636 / 2768923 FlyBaseID:FBgn0032551 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:257 Identity:72/257 - (28%)
Similarity:105/257 - (40%) Gaps:43/257 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 AYRIINGHTAKYNSSPWMVFLHSTTDMF---VCGGSLITDKLVLTAAHCFIANQHLVARLGEYER 103
            |..||.||.||.:|.|:|.:|....:..   .|||.||.:..|||||||  :...:...||.:  
  Rat    18 AGEIIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC--SGSKINVTLGAH-- 78

  Fly   104 TRSEECTGYYCNFREEHM------VDAGFKHKLYDPNTHANDIAILRLSKSVVYRDNIRPICVVW 162
                       |.:|:..      |.....|..|:..|.:|||.:|:|.........::|:.:  
  Rat    79 -----------NIKEQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNL-- 130

  Fly   163 DHRWRHYLDKIDLLTATGWGKT-QMESDSDALQTLDIRRQPPDVCAKFIGQTI-AGNQFCAGNWD 225
             .|....:...|:....||||. .|...||.||.:::..|....|..::.... ..|:.|||  |
  Rat   131 -PRRNVKVKPGDVCYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDKANEICAG--D 192

  Fly   226 SNL----CNGDSGGPLGAVITHKNTQRFVQVGIASYTNRNCQKASVFTDVLSHAEFILRVWR 283
            ..:    ..|||||||   :..|     |..||.||...:......||.|.:...:|.:..:
  Rat   193 PKIKRASFRGDSGGPL---VCKK-----VAAGIVSYGQNDGSTPRAFTKVSTFLSWIKKTMK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18636NP_995714.2 Tryp_SPc 45..278 CDD:238113 70/247 (28%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 71/250 (28%)

Return to query results.
Submit another query.