DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18636 and CLIPB6

DIOPT Version :9

Sequence 1:NP_995714.2 Gene:CG18636 / 2768923 FlyBaseID:FBgn0032551 Length:349 Species:Drosophila melanogaster
Sequence 2:XP_307757.4 Gene:CLIPB6 / 1269161 VectorBaseID:AGAP003252 Length:407 Species:Anopheles gambiae


Alignment Length:279 Identity:81/279 - (29%)
Similarity:124/279 - (44%) Gaps:37/279 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QFLDPACGIRTQSRTAYRIINGHTAKYNSSPWMVFL-HSTTD---MFVCGGSLITDKLVLTAAHC 87
            :.|...||::...    |||.|..|:.:..||...: |...:   .|.|||:||:|:.|||||||
Mosquito   135 RLLPDECGVQYTD----RIIGGERAQLDEYPWTALIQHRRKNGELKFHCGGALISDRYVLTAAHC 195

  Fly    88 FIANQH----LVARLGEYERTRSEECTGYY----CN------FREEHMVDAGFKHKLYDPNTHAN 138
            ....|.    ...||||::....::|...|    |.      ..|:::|..|:   .....:..|
Mosquito   196 IENIQRSWTLTAVRLGEWDIDSDQDCANSYGERVCADPVQDIAIEKYIVHPGY---AVQKQSVKN 257

  Fly   139 DIAILRLSKSVVYRDNIRPICVVWDHRWRHYLDKIDLLTATGWGKTQMESDSDALQTLDIRRQPP 203
            |||.:||::..|:.|.::|||:..:...|............|||:|:....|.....:.:...|.
Mosquito   258 DIAQVRLARPAVFNDYVQPICLPLEPAQRTISYDGQRFVVAGWGQTEDAPRSRYKLYVGVSGVPE 322

  Fly   204 DVCAKFIGQT-IAGNQFCAG---NWDSNLCNGDSGGPLGAVITHKNTQRFVQV-GIASYTNRNC- 262
            ..|.:...|. |...|.|||   ..||  |.||||||| ..:..:|::..:.: |:.|| .|.| 
Mosquito   323 QTCQQQYPQAGIDRTQVCAGGTAKQDS--CRGDSGGPL-MYVGQRNSEGVMYLGGLVSY-GRQCG 383

  Fly   263 --QKASVFTDVLSHAEFIL 279
              ....|:|.|....::|:
Mosquito   384 LEGVPGVYTRVNQFVDWIV 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18636NP_995714.2 Tryp_SPc 44..278 CDD:214473 77/259 (30%)
Tryp_SPc 45..278 CDD:238113 76/258 (29%)
CLIPB6XP_307757.4 CLIP 45..97 CDD:288855
Tryp_SPc 148..401 CDD:214473 77/259 (30%)
Tryp_SPc 149..404 CDD:238113 77/261 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.