DRSC/TRiP Functional Genomics Resources

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Protein Alignment Remo and adgra1

DIOPT Version :10

Sequence 1:NP_572870.2 Gene:Remo / 2768909 FlyBaseID:FBgn0030466 Length:1797 Species:Drosophila melanogaster
Sequence 2:XP_017951424.2 Gene:adgra1 / 101734680 XenbaseID:XB-GENE-6044828 Length:1305 Species:Xenopus tropicalis


Alignment Length:1389 Identity:332/1389 - (23%)
Similarity:549/1389 - (39%) Gaps:309/1389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GTAS-SCP----RKCSCRS-------TAENIHSLKIRCD--EQQITNWRELDFGEDVTSIVSIN- 89
            |||| :||    ..|.|.|       ..::|: :|:.|.  |...|....|...:.||.::|.| 
 Frog    22 GTASRNCPDLTIDSCLCSSERSKGLGRQKSIY-VKVVCSGGELMETLQPSLLPNKTVTMVLSHNK 85

  Fly    90 ----ASKNSIALITAE--DFRN-------------FTELKRLDLSFNLLTELDKDTFGDSLAHLE 135
                .:::.|.|.:.|  |.||             .|||:|||||.|.:..|..:.| ..|..|:
 Frog    86 ISLLKNRSFIGLNSLEKLDLRNNLISTIEPGAFYGLTELRRLDLSNNRIGCLAPEMF-LGLFSLQ 149

  Fly   136 KLKLAGNAISHIYEGTFDQMPKLKLLDLSGNPLACDCGLIWLIAWSSSREVRLQPPPKCESPGNF 200
            ||.|:||..|.:..|.|.::|.|..:......|.|||.|.|::.||::..||:.....||.|...
 Frog   150 KLNLSGNIFSTLIPGLFQELPSLNTVFFRAESLICDCNLKWILQWSATASVRIGEETTCEHPSRV 214

  Fly   201 RGMPLKKLRVGKDFHCETLLQ-PLLELIPSQNQVAFEGDELQLKCHAPRVAIGVPRESEDLPTKA 264
            ||:....|:..: ..|:..|: ||.:|||||||:.|.||.|...|.|..:|     ::.|:    
 Frog   215 RGLIFDTLKEDQ-LTCDGPLEIPLFKLIPSQNQIVFHGDRLPFHCTATFLA-----DTTDI---- 269

  Fly   265 YVFWGW---SEKIRAKNSTEDIIYQDPTKVFGDVNLETRHSTDSGILQSILRIASLTQNHTGMWD 326
                .|   .|.|:......:::.:   .:..|..|.||     |::     :.|:....:|.|:
 Frog   270 ----NWFHNGELIQTNEERGNLVEE---SIIHDCCLITR-----GLI-----LFSVDIEASGSWE 317

  Fly   327 CTLRSQQANLSQAIVLHVVAKGTLYCEARVVHTNKGTYHWPRTMRGETVLQECVEEP--SDATQA 389
            |.:.:...:.::.:.:.|:..|..||.|..|..|||.|.||:|:.|.|....|.:.|  |...|.
 Frog   318 CQVNTSHGSFTKRVEILVLETGAPYCPAERVINNKGDYRWPKTLAGVTAFLPCRQSPYISILRQE 382

  Fly   390 R----RASHECGPSGEWLNLDTESCVYVSETTRILEQFAKVNLTLTKGQNALEIARRLHNFTQAQ 450
            |    .|..:|..:|.|...|..:|.|..|.||:|..|:.:.:   ...|..|.|::|..:|.. 
 Frog   383 RNVELEAWRKCERTGHWAEEDYSACAYSHEVTRLLHAFSLMEI---NSSNVNEYAQQLVLYTGG- 443

  Fly   451 TQLNRIRDPMDLEYIA---RTLVKYLDQLEQPQQQQEISHLLMDIVSQLLNLPAHLFRAAQSEQG 512
              .:...|.||:.|:|   ..|:.:.|...|      :|..:::|.|.::.:...:...||:|..
 Frog   444 --ASAFADKMDVLYVAEMMEKLILFTDHTNQ------LSDAVIEIASNMMLVDDQILSMAQNEAK 500

  Fly   513 TGQRLLHVVESSAMRLALASTQAEPLPAEMIPWRGSLAQQRNLFVEFFNISLDA-------FVSL 570
            ...|::..||..::     :.:|:.:....:                 ||:|:|       |:.:
 Frog   501 ACSRIVQCVEIISL-----NNKAQAVSKVSL-----------------NIALEAVIIKPANFLGM 543

  Fly   571 SCVWLEQSPRGFQCNSANDT-IPMYEHGDID---------------------------------A 601
            :|:       .:|..|:|.. .|::.:|.:|                                 |
 Frog   544 TCI-------AYQKTSSNSVRPPIHGNGILDAENTRNQNLIVKCNNGNISGSLLHFSAKNTVAVA 601

  Fly   602 AIQLPYSVIGNSSTTLPATTTIRSLRLMISLHRNGKLLPNLRGS-----HNESLSSAIIGILAYS 661
            :|.||.||...|.:......:...|:|::  .|||||.|:...|     |.:..:.|...:|: .
 Frog   602 SIDLPPSVFAQSPSVQSVDNSTCKLQLIV--FRNGKLFPSTGNSSHLADHGKRRTVATPAVLS-K 663

  Fly   662 SDGEALQFRADNELDPEEDVYQQRVTVMLRAHPYHNPLSAPQPAWWDAD----EQRWETSVCQQH 722
            .||    :|..|..:|        ||:.|| |....  |.|..|:||.|    ...|....|...
 Frog   664 IDG----YRVGNLTNP--------VTIALR-HTAQG--SDPVAAFWDFDLLNGHGGWCGESCHIT 713

  Fly   723 YQHRTLVMFSCSRTGYYGLLQRSQYLNDFRS----EESGARFRHPPAAVYAGCGLLFACCAFNAV 783
            .....:....|:|.|.:.:|.      |.::    .:....|.||  .|||...::..|...:.:
 Frog   714 TSAGNITTIQCTRLGNFAVLM------DLKTVLSLPQYPGEFLHP--VVYACTAVMLLCLFASII 770

  Fly   784 TFAVFGRAVRINRVQRHALVNTWLALGALALAFSLGIYQTASQPQCRLLGLLMHYLGLCVLLWVC 848
            |:.|....:||:|...|.|:|...........|:.||.:|.....|:.:|:::||..||.:||:.
 Frog   771 TYIVHHSTIRISRKGWHMLLNFCFNTALTFAVFAGGINRTNYPIVCQSVGIVLHYSTLCTVLWIG 835

  Fly   849 VSLSSMYKRLTKTTTSGQGQCPGQDMEPQRERERKPILGIYLVGWGIALLICGISSAVNLAEYAT 913
            |:..::||::||.....    |..|..|   ..::|:|..||:..|:..:||||::|.|:..|..
 Frog   836 VTARNIYKQVTKKPHPP----PNADQPP---FPKQPMLRFYLISGGVPFIICGITAATNMKNYGN 893

  Fly   914 YD---YCFLHSSTTLNALLVPAVILVIFCGILALCIYYQLSQQAVNVLQLQMQHQQNRQYSDNNT 975
            .|   ||::....:|.|...|...:|:...|..||.|.||.:......:|:.:.::.::      
 Frog   894 EDNTPYCWMAWEPSLGAFYGPVAFIVLVTCIYFLCTYIQLRRHPERKYELKERTEEQQR------ 952

  Fly   976 QATEHIDLDWLDANGSATTAAIGGGSGNHGGRKEQDHMQEQYSTLSNPLSSIVDDFERSNLSHLR 1040
                                 :.|....|....|...:.:  :|.|...||::.: |.|..:.||
 Frog   953 ---------------------LAGAETGHSHLAEPGSVSQ--ATCSMISSSLLAN-EHSFKAQLR 993

  Fly  1041 GHFIFLVLYAGAWLSAAAYVNGGQELYVLSFAGC-----CSVLGIFLLIFYNLSRNDARQAW--- 1097
            .....|.|:...|...|..|:  ||.::.....|     |..||:|.||.:...|:|....|   
 Frog   994 AAAFTLFLFTATWTFGALAVS--QEPFLDMIFSCLYGAFCVTLGLFTLIHHCAKRDDVWHCWWSC 1056

  Fly  1098 -SQGRDGRSIP--AKLVTYNNG-----------SQARGAHPSSMMPGPGTAMISNSIVAYK---- 1144
             ...::...:|  |:..|..||           |......|....|..|...::|...|..    
 Frog  1057 CPSKKNAYPVPANARQKTNINGDAQVHTTCLQDSPCPNKSPMYNRPPAGHCKLTNIQSAQNHVNC 1121

  Fly  1145 ---ANPGPGSLY-----------EANNSAGSRSNSQCSRSMRSQT------RSQTRSQQEQLLQA 1189
               ..|....::           ..:|.:..|.|....|.::|:|      |.::.:::|.....
 Frog  1122 LSPVTPCCAKIHCEQLMDDESHIHVHNESAFRPNMHVHRCLKSRTKPRYFSRHRSAAEREYAYHI 1186

  Fly  1190 NGAGGVTIINNTSGQPGAGGGPAAGGVSGSTGGA-PVP----PHSLNA---------------LL 1234
            ..:...:|.::.:..|.:......|...|..|.: |.|    |.|.:|               :.
 Frog  1187 PSSIDGSIHSSHTDSPHSTHEGHTGHRRGCCGASDPYPTISQPESSDASTAIFSCGKMPDTDTVH 1251

  Fly  1235 HGSSHDLIPSAEIF----YNPNQI 1254
            ||:..:|.|..:.|    .|||.|
 Frog  1252 HGAHFELHPRRQSFPFNTTNPNGI 1275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RemoNP_572870.2 PPP1R42 <56..148 CDD:455733 35/113 (31%)
LRR_8 107..168 CDD:404697 23/60 (38%)
leucine-rich repeat 109..133 CDD:275378 10/23 (43%)
leucine-rich repeat 134..157 CDD:275378 9/22 (41%)
PCC 139..>205 CDD:188093 23/65 (35%)
HRM <366..412 CDD:413313 16/51 (31%)
7tm_GPCRs 760..1101 CDD:475119 89/352 (25%)
TM helix 1 763..787 CDD:320387 6/23 (26%)
TM helix 2 799..820 CDD:320387 4/20 (20%)
TM helix 3 830..852 CDD:320387 8/21 (38%)
TM helix 4 887..903 CDD:320387 6/15 (40%)
TM helix 5 921..944 CDD:320387 5/22 (23%)
TM helix 6 1039..1061 CDD:320387 6/21 (29%)
TM helix 7 1065..1090 CDD:320387 8/29 (28%)
adgra1XP_017951424.2 LRR_8 99..156 CDD:404697 20/57 (35%)
leucine-rich repeat 100..123 CDD:275378 4/22 (18%)
leucine-rich repeat 124..147 CDD:275378 10/23 (43%)
PCC 128..>216 CDD:188093 31/88 (35%)
leucine-rich repeat 148..171 CDD:275378 9/22 (41%)
Ig 236..335 CDD:472250 29/124 (23%)
Ig strand B 254..258 CDD:409353 1/3 (33%)
Ig strand C 267..272 CDD:409353 1/12 (8%)
Ig strand E 291..305 CDD:409353 5/23 (22%)
Ig strand F 315..320 CDD:409353 2/4 (50%)
Ig strand G 330..333 CDD:409353 0/2 (0%)
HRM <357..409 CDD:397086 16/51 (31%)
GPS 689..733 CDD:460350 10/43 (23%)
7tmB2_GPR123 747..1059 CDD:320666 89/352 (25%)
TM helix 1 749..774 CDD:320666 8/26 (31%)
TM helix 2 786..808 CDD:320666 5/21 (24%)
TM helix 3 817..844 CDD:320666 9/26 (35%)
TM helix 4 865..885 CDD:320666 8/19 (42%)
TM helix 5 904..933 CDD:320666 8/28 (29%)
TM helix 6 987..1014 CDD:320666 7/26 (27%)
TM helix 7 1021..1046 CDD:320666 7/24 (29%)

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