DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3857 and SMG9

DIOPT Version :10

Sequence 1:NP_996330.1 Gene:CG3857 / 2768908 FlyBaseID:FBgn0023520 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_005259114.1 Gene:SMG9 / 56006 HGNCID:25763 Length:521 Species:Homo sapiens


Alignment Length:495 Identity:112/495 - (22%)
Similarity:191/495 - (38%) Gaps:152/495 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RDREQ-ETWDRERDKDRKLE-----------------RDREAEPSPSCYPDTPPA---LKTMIVN 89
            |:|:. ..|:||| :|...|                 .:|..:|.|...|..|||   |:..|| 
Human    37 RERDYIAPWERER-RDASEETSTSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIV- 99

  Fly    90 RTGEVRPADRCQMPLA--GGALVQGSGQLSAVPSSSVCAALVSSVPTSRDKGSCSG--------- 143
               .::|.:..:.|:|  |.:..:|    :|.|..:..|.         .||...|         
Human   100 ---LMKPREEGKGPVAVTGASTPEG----TAPPPPAAPAP---------PKGEKEGQRPTQPVYQ 148

  Fly   144 ----GAGTAGTSAGAPNALQ-ELQPPRMNRPTPLIVANGIFNANARKLFHKTNTDFTVIGVLGGQ 203
                |.|||..:|..|...| :|.||...:.:..:|.:.:...::...:....||..|:||||.|
Human   149 IQNRGMGTAAPAAMDPVVGQAKLLPPERMKHSIKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQ 213

  Fly   204 SSGKSTLLNLLAAERSLDYDYYQHLFSPEADECIFATR---HKLKPNNGQKSILRPRTETLQFFI 265
            .:|||.:::||:|.            :||.|:..:..|   .::|...|.      :|..:.|||
Human   214 GTGKSMVMSLLSAN------------TPEEDQRTYVFRAQSAEMKERGGN------QTSGIDFFI 260

  Fly   266 TRERHILLDTPPLMP-------VGKD----------SDHQDLYSLGTMAQLLSVCHILILVIDGL 313
            |:||.:.|||.|::.       :..|          ..:.::.||...|.|.:|||::|:|.|..
Human   261 TQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFLFTVCHVVIVVQDWF 325

  Fly   314 A-LEQLRLINAALRLRPTLHCKGYV----------RDHMPQVVFVRARAHRIDF---EIQQRE-R 363
            . |...|.:..|..::|:.....:.          .::.|.:||::.:|.|.||   :::|.. .
Human   326 TDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEGTEYYPHLVFLQNKARREDFCPRKLRQMHLM 390

  Fly   364 LDKKLAYLYGPTGLPIYRGRGDARCL-----------------NTFLLPEVSS------------ 399
            :|:.:|:.:       .|.:|....|                 |.||:|.:.|            
Human   391 IDQLMAHSH-------LRYKGTLSMLQCNVFPGLPPDFLDSEVNLFLVPFMDSEAESENPPRAGP 448

  Fly   400 NKATAF--------HSCLGELVRQFRERILGCTRISMCHT 431
            ..:..|        |.....||.:.|.:::...|..:.||
Human   449 GSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSMARPQLSHT 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3857NP_996330.1 P-loop containing Nucleoside Triphosphate Hydrolases 188..>318 CDD:476819 43/150 (29%)
SMG9XP_005259114.1 None

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