DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33253 and AT1G69840

DIOPT Version :10

Sequence 1:NP_001259699.1 Gene:CG33253 / 2768889 FlyBaseID:FBgn0030992 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_177142.1 Gene:AT1G69840 / 843320 AraportID:AT1G69840 Length:286 Species:Arabidopsis thaliana


Alignment Length:214 Identity:49/214 - (22%)
Similarity:82/214 - (38%) Gaps:39/214 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 VDLRTVSFDVPPQEVLSKDSVTVTVDAVVYYR--ISDPLKAVIQVYNYSHSTSLLAATTLRNVLG 195
            :.||....|| ..|..:||:|.|||.|.:.||  ......|..::.|..:.........:|..:.
plant    47 LSLRVQQLDV-RCETKTKDNVFVTVVASIQYRALAESAQDAFYKLSNTRNQIQAYVFDVIRASVP 110

  Fly   196 TRNLSELLTERETISHTMQMSLDEATDPWGVKVERVEIKDVSLPTALQRAM-----------AAE 249
            ..:|.....::..|:.|::..|::|...:|.::.:..|.|:.....::|||           ||.
plant   111 KLDLDSTFEQKNDIAKTVETELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNEINAASRMREAAS 175

  Fly   250 AEAAREARAKVIAAEGEMKSS---------------RALREA----SEIISASPS------ALQL 289
            .:|..|...::..||||.:|.               ..||.:    ||.:..:.|      .|..
plant   176 EKAEAEKILQIKRAEGEAESKYLSGMGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVT 240

  Fly   290 RYLQTLSSISTEKNSTIIF 308
            :|..||..|.....|..:|
plant   241 QYFDTLKEIGASSKSNSVF 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33253NP_001259699.1 SPFH_SLP-4 112..319 CDD:259813 49/214 (23%)
AT1G69840NP_177142.1 SPFH_like_u4 10..278 CDD:259805 49/214 (23%)

Return to query results.
Submit another query.