DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33253 and nphs2

DIOPT Version :10

Sequence 1:NP_001259699.1 Gene:CG33253 / 2768889 FlyBaseID:FBgn0030992 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_017949096.1 Gene:nphs2 / 100498000 XenbaseID:XB-GENE-485101 Length:376 Species:Xenopus tropicalis


Alignment Length:277 Identity:123/277 - (44%)
Similarity:182/277 - (65%) Gaps:8/277 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LKTSENDD------MGCVEILATVVSVLIMVLTFPISVFICFKVVSEYERAVIFRMGRLRSGGAR 116
            |:||:.||      ....|.|.....:|:::||.|:|::.|.|||.|||||||||:||:.||.||
 Frog    78 LETSQKDDGVKPAGFRVFEGLLIFCCLLLVILTLPLSIWFCVKVVREYERAVIFRLGRMLSGRAR 142

  Fly   117 GPGVFFVLPCVDDYYPVDLRTVSFDVPPQEVLSKDSVTVTVDAVVYYRISDPLKAVIQVYNYSHS 181
            |||:||.|||:|..:.||.|..:|:||..::::||.||:.:|.:.|||:.:....:..|.:.|.:
 Frog   143 GPGLFFYLPCLDKCHKVDFRLKTFEVPFHQIVTKDLVTLEIDVICYYRLENACLFLTSVSSISSA 207

  Fly   182 TSLLAATTLRNVLGTRNLSELLTERETISHTMQMSLDEATDPWGVKVERVEIKDVSLPTALQRAM 246
            ..||..||.:.:|..|...::|.||::|...::::||.||..||:||||.|||||.||..::::|
 Frog   208 FQLLVQTTTKRLLAHRAFLDILLERKSIGEEVKVALDAATCHWGIKVERTEIKDVKLPEEVKQSM 272

  Fly   247 AAEAEAAREARAKVIAAEGEMKSSRALREASEIISASPSALQLRYLQTLSSISTEKNSTIIFPLP 311
            |.||||.|.|:.||||||||...|..::.|:|.:|.||:|:|||||.||..:::||.:|.:.|||
 Frog   273 AVEAEAQRHAKVKVIAAEGEKTVSEYIKLAAEKLSGSPTAIQLRYLHTLQCMTSEKPATFVLPLP 337

  Fly   312 MELLTPFLNTQAHSQQL 328
            .:|:.  ||..|...::
 Frog   338 FDLMN--LNAVARLPEI 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33253NP_001259699.1 SPFH_SLP-4 112..319 CDD:259813 93/206 (45%)
nphs2XP_017949096.1 SPFH_podocin 116..338 CDD:259809 106/221 (48%)

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