Sequence 1: | NP_001368966.1 | Gene: | Sdic4 / 2768886 | FlyBaseID: | FBgn0053499 | Length: | 554 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_010776.1 | Gene: | PAC11 / 852099 | SGDID: | S000002896 | Length: | 533 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 576 | Identity: | 108/576 - (18%) |
---|---|---|---|
Similarity: | 197/576 - (34%) | Gaps: | 188/576 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 STYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQT--------------TSTGGGNGDVL 61
Fly 62 AFDAQGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAPAITPLEIKK-ETEVKKEVNELSEE 125
Fly 126 QKQMIILSENFQRFVVRAGRVIERALSENVDIYTD-------YIGG-------------GDSEEA 170
Fly 171 NDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFK 235
Fly 236 KSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTP-------IQRTPLSAAA 293
Fly 294 HTHPVYC-LQMVGTQNAHNVISISSDGKLCSWS---LDMLSQPQ---------------DT---L 336
Fly 337 ELQQRQSK--AIAITSMAFPANEINSLVMGSEDGYVY------------SASRHGLRSGVNEVYE 387
Fly 388 RHLGPITGISTHYNQLSPDFGHLFLTSSIKI-WSLKLPISSCQFSVVSGINSNKPLY-------- 443
Fly 444 ------SFEDNSDYMMDVAWSPVHPALFAAVDGSGRLDL--WNLNQDTEVPTASIV 491 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sdic4 | NP_001368966.1 | Dynein_IC2 | 23..51 | CDD:402922 | 7/41 (17%) |
WD40 | 196..523 | CDD:421866 | 68/356 (19%) | ||
WD40 repeat | 196..245 | CDD:293791 | 4/48 (8%) | ||
WD40 repeat | 251..289 | CDD:293791 | 11/44 (25%) | ||
WD40 repeat | 298..337 | CDD:293791 | 11/60 (18%) | ||
WD40 repeat | 349..446 | CDD:293791 | 22/123 (18%) | ||
WD40 repeat | 452..490 | CDD:293791 | 8/39 (21%) | ||
WD40 repeat | 498..524 | CDD:293791 | |||
PAC11 | NP_010776.1 | WD40 | <433..466 | CDD:395323 | 10/36 (28%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101571 | |
Panther | 1 | 1.100 | - | - | O | PTHR12442 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |