DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sdic4 and dnai1.1

DIOPT Version :9

Sequence 1:NP_001368966.1 Gene:Sdic4 / 2768886 FlyBaseID:FBgn0053499 Length:554 Species:Drosophila melanogaster
Sequence 2:XP_021324725.1 Gene:dnai1.1 / 570363 ZFINID:ZDB-GENE-040910-7 Length:105 Species:Danio rerio


Alignment Length:74 Identity:18/74 - (24%)
Similarity:28/74 - (37%) Gaps:26/74 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 PELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMS-----TCFAKFNP--NLIL 263
            |.|.|...|..:.|.|..:.:                  ||..|:|     ||. :|||  .:|:
Zfish    12 PSLFVSQVHVFDLSINRFEAL------------------CQQRVVSTKRHLTCI-EFNPVHPIII 57

  Fly   264 GGTYSGQIV 272
            .|...|:::
Zfish    58 VGNDRGRVI 66

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sdic4NP_001368966.1 Dynein_IC2 23..51 CDD:402922
WD40 196..523 CDD:421866 18/74 (24%)
WD40 repeat 196..245 CDD:293791 6/38 (16%)
WD40 repeat 251..289 CDD:293791 9/29 (31%)
WD40 repeat 298..337 CDD:293791
WD40 repeat 349..446 CDD:293791
WD40 repeat 452..490 CDD:293791
WD40 repeat 498..524 CDD:293791
dnai1.1XP_021324725.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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