Protein Alignment Sdic4 and wdr-60

DIOPT Version :9

• Sequence 1: NP_001368966.1
• Gene: Sdic4 / 2768886
• FlyBaseID: FBgn0053499
• Length: 554
• Species: Drosophila melanogaster
• Sequence 2: NP_001367569.1
• Gene: wdr-60 / 175676
• WormBaseID: WBGene00016165
• Length: 668
• Species: Caenorhabditis elegans
• Alignment Length: 605
• Identity: 109/605 - (18%)
• Similarity: 214/605 - (35%)
• Gaps: 146/605 - (24%)

  Fly    26 LSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDAQGDDEESSLQNLGNGFTSKLPPGYL 90
            |:..:::.|...||.|:. .|.:....|.....|...:....::|..:.:....|..:|| .|.:
 Worm   103 LATSHMRRTEASPKPTIA-PKISNAQITVQSTIDNKPYSYHNEEERQTQEQRAFGRLNKL-RGLI 165

  Fly    91 T--------------------HGLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMIILSEN 135
            :                    :.||:.|..|...|..:...| ||:.|..| :||::.....||:
 Worm   166 SIEVTKSQVFTDLSSNIFEPFNSLPSNKSHALTQTGKDCHTE-EVQTERGE-TEEKETQCPHSES 228

  Fly   136 ------------------FQRFVVRAGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLN 182
                              .::|...|.:.|...|          |....|.|.::.|..:....:
 Worm   229 TRIEDGIEKERTSTDRARLKKFFFAATQTIREIL----------ISEDKSAEEDETREKSISKFS 283

  Fly   183 RVFYDERW------SKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKF---KKST 238
            |.:...|.      ||:.||...:     .:.|:.:| ...||| .||.:......:|   |:..
 Worm   284 RGYNPFRLCQVVTKSKSTCIRKGE-----SDSVLVAY-EIFESP-APDLINKSLIVEFFVHKRRP 341

  Fly   239 PEDVFHCQSAV----------------MSTCFAKFNPNLILGGTYSGQIVLW---DNRVQKRTP- 283
            |:.:|..:|.|                |...|..|  :|.:...:....:.|   :..:..|.|
 Worm   342 PKRLFVVESIVSVMELSQSSQILYVCLMDGTFCAF--DLSITDAFFDDNLPWVDSETNIALRRPT 404

  Fly   284 ----IQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ----- 339
                ...|.:|.|.   |:..:.:..:.....:.:|.:.|.:..|..:.:.:.:..|.|.
 Worm   405 FDSSFLATTVSDAT---PLIGIALGKSSVGEEITTIDTAGTISYWIANRVEKNELRLLLTAVIRP 466

  Fly   340 ----QRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVY---ERHLGPITGIS 397
                :|.|.:.|:::.....|.:...: |::.|.:||..:......:.::|   :...|.:|.|:
 Worm   467 HPVLKRHSTSFAVSAFCHVTNPLRFFI-GTDTGMLYSMYKSDTSQAIPKIYKTEKEKYGEVTVIA 530

  Fly   398 THYNQLSPDFGHL----FLTSSIKIWSLKLPISSCQFSVVSGINSNKPLYSFEDNSDYMMDVAWS 458
            .     :|....:    |...||.::      .:.|.|.:..|.:       .|.|..:..::||
 Worm   531 A-----NPSDNTVLIVGFSNGSISVY------RTTQASSIVNIPT-------ADLSTRVTWISWS 577

  Fly   459 PVHPALFAAVDGSGRLDLWNLN-----QDTEVPTASIVVAGAPALNRVSWTPSGL---HVCIGDE 515
            ..:|:.|..:..|..:..|:|.     :..:..|.|:.|..:.     :|.....   ::..|..
 Worm   578 LTNPSGFYTIHNSNIITYWDLGFKLSPKSVDHRTDSVQVLASD-----TWLSENAKIGYMAFGLS 637

  Fly   516 AGKLYVYDVAENLAQPSRDE 535
            .|...|: |.|:.|:.:::|
 Worm   638 NGDSEVH-VLEDPARKNQNE 656

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sdic4	NP_001368966.1	Dynein_IC2	23..51	CDD:402922	6/24 (25%)
		WD40	196..523	CDD:421866	65/377 (17%)
		WD40 repeat	196..245	CDD:293791	12/51 (24%)
		WD40 repeat	251..289	CDD:293791	7/45 (16%)
		WD40 repeat	298..337	CDD:293791	3/38 (8%)
		WD40 repeat	349..446	CDD:293791	16/103 (16%)
		WD40 repeat	452..490	CDD:293791	8/42 (19%)
		WD40 repeat	498..524	CDD:293791	4/28 (14%)
wdr-60	NP_001367569.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910