DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sdic4 and DNAI3

DIOPT Version :9

Sequence 1:NP_001368966.1 Gene:Sdic4 / 2768886 FlyBaseID:FBgn0053499 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_660155.2 Gene:DNAI3 / 126820 HGNCID:30711 Length:891 Species:Homo sapiens


Alignment Length:635 Identity:111/635 - (17%)
Similarity:205/635 - (32%) Gaps:234/635 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIY 158
            :|.:||::.. |.....|....:....|.|||:|:.:..|:....|:..|...:|.||.:| :|.
Human   235 IPQIKDISTQ-TKWTYPKNATTQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQN-EIM 297

  Fly   159 TDYIGG----GDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGS------- 212
            ..:|..    .:.|....:::...|...:.|.|......:.||.:.|......|:..|       
Human   298 NTFIDDWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIAVSVAVRLSF 362

  Fly   213 ---YHNNEESPNEPDGVVMVW------NTKFKKSTPEDVFHCQSAVMSTCFAKF---NPNLILGG 265
               .|.:.:...:| .:::.|      :.:....:|:|:|         || ||   :||:|.||
Human   363 EDRVHFSGKLLLQP-SLILFWSFSDPIHPQLMLESPDDIF---------CF-KFCPSDPNIIAGG 416

  Fly   266 TYSGQIVLWD-----NRVQ---------KRTPIQRTPLSAAAHTHPVYCLQ-------------- 302
            ..:||||:||     :|::         ||..::           |::.|:              
Human   417 CINGQIVMWDITAHADRIENIKAGGSRSKRATLK-----------PMFLLEPESNKEAMYIRHCA 470

  Fly   303 MVGTQNAH-------------------------------NVISISSDGKLCSW------------ 324
            :...:|.|                               .:::.|:|..:|.|            
Human   471 VSSIENGHKKVITDIHWLSDTFEINRMGSVFENRSGICCQLVTCSADCTICFWDIRPQKPLTPQT 535

  Fly   325 ---------------------------------------SLD------------MLSQPQDTLEL 338
                                                   |||            :|.:.||.:..
Human   536 TEKKKEESIEIPFDVPSTFLHLDLSWKPLTKVRLSKGETSLDHCPTKISLNEDHLLCKTQDKMLA 600

  Fly   339 QQRQSKA----------IAITSMAFPANEI-NSLVMGSEDG-YVYS------------------A 373
            |.:..||          ..:.::..|.::. ....:|:|:| .:|:                  .
Human   601 QSKTEKAEEMNPYHNLESGMANLLKPIDDFCTKFFVGTEEGEVIYTDWKMEKDPETGRLMSKKPV 665

  Fly   374 SRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTS---SIKIWSLKLPISSCQFSVVSG 435
            |.|.:..|               :.|..|.||.:..:.||.   ::.||.             .|
Human   666 SHHTIHDG---------------TVHTIQRSPFYNDIILTVGGWNVAIWK-------------EG 702

  Fly   436 INSNKPLYSFEDNSDYMMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTAS--IVVAGAPAL 498
            :.:...|.|......|... .||...|.:|......|.:|:|:|.:.|..|..|  |.:.....:
Human   703 VMTGPLLQSCCAPKRYTSG-HWSLTRPGVFYIGREDGYIDIWDLLEKTHEPAQSQNICITMITYI 766

  Fly   499 NRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLS-EIK 547
            ....::.....:...|..|.|::.::...|::||.:|.:..|.:.. |:|
Human   767 KPWIFSSKQQFIATADYYGTLHILEIPWTLSRPSTNEMASVNHYFEREVK 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sdic4NP_001368966.1 Dynein_IC2 23..51 CDD:402922
WD40 196..523 CDD:421866 81/502 (16%)
WD40 repeat 196..245 CDD:293791 11/64 (17%)
WD40 repeat 251..289 CDD:293791 18/54 (33%)
WD40 repeat 298..337 CDD:293791 13/146 (9%)
WD40 repeat 349..446 CDD:293791 19/119 (16%)
WD40 repeat 452..490 CDD:293791 11/39 (28%)
WD40 repeat 498..524 CDD:293791 3/25 (12%)
DNAI3NP_660155.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
WD40 197..>531 CDD:225201 60/319 (19%)
WD40 370..793 CDD:225201 75/473 (16%)
WD 1. /evidence=ECO:0000255 395..435 19/49 (39%)
WD 2. /evidence=ECO:0000255 477..533 5/55 (9%)
WD 3. /evidence=ECO:0000255 670..709 10/66 (15%)
WD 4. /evidence=ECO:0000255 713..753 10/40 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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