Sequence 1: | NP_001368966.1 | Gene: | Sdic4 / 2768886 | FlyBaseID: | FBgn0053499 | Length: | 554 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446332.2 | Gene: | Dync1i2 / 116659 | RGDID: | 620174 | Length: | 638 | Species: | Rattus norvegicus |
Alignment Length: | 542 | Identity: | 286/542 - (52%) |
---|---|---|---|
Similarity: | 375/542 - (69%) | Gaps: | 61/542 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 PLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDAQGDDEESSLQNLGNGFTSKLPP 87
Fly 88 GYLTHGLPTVKDVAPAITPLEIKKETEVKKE--------VNELSEEQKQMIILSENFQRFVVRAG 144
Fly 145 RVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELV 209
Fly 210 VGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLW 274
Fly 275 DNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ 339
Fly 340 QRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLS 404
Fly 405 PDFGHLFLTSS----IKIWSLKLPISSCQFSVVSGINSNKPLYSFEDNSDYMMDVAWSPVHPALF 465
Fly 466 AAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQ 530
Fly 531 PSRDEWSRFNTHLSEIKMNQSD 552 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sdic4 | NP_001368966.1 | Dynein_IC2 | 23..51 | CDD:402922 | 10/27 (37%) |
WD40 | 196..523 | CDD:421866 | 212/330 (64%) | ||
WD40 repeat | 196..245 | CDD:293791 | 30/48 (63%) | ||
WD40 repeat | 251..289 | CDD:293791 | 29/37 (78%) | ||
WD40 repeat | 298..337 | CDD:293791 | 30/38 (79%) | ||
WD40 repeat | 349..446 | CDD:293791 | 45/100 (45%) | ||
WD40 repeat | 452..490 | CDD:293791 | 30/37 (81%) | ||
WD40 repeat | 498..524 | CDD:293791 | 12/25 (48%) | ||
Dync1i2 | NP_446332.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..135 | 286/542 (53%) | |
Interaction with DYNLT1. /evidence=ECO:0000269|PubMed:27502274 | 133..165 | 11/29 (38%) | |||
Dynein_IC2 | 135..163 | CDD:402922 | 10/27 (37%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 154..209 | 19/88 (22%) | |||
WD 1 | 277..326 | 29/48 (60%) | |||
WD40 repeat | 282..331 | CDD:293791 | 30/48 (63%) | ||
WD40 | 329..>599 | CDD:225201 | 184/284 (65%) | ||
WD 2 | 330..370 | 32/39 (82%) | |||
WD40 repeat | 339..377 | CDD:293791 | 30/37 (81%) | ||
WD 3 | 379..420 | 33/40 (83%) | |||
WD40 repeat | 385..426 | CDD:293791 | 31/40 (78%) | ||
WD 4 | 429..469 | 22/39 (56%) | |||
WD40 repeat | 434..481 | CDD:293791 | 24/46 (52%) | ||
WD 5 | 474..519 | 23/59 (39%) | |||
WD40 repeat | 489..521 | CDD:293791 | 17/46 (37%) | ||
WD40 repeat | 527..565 | CDD:293791 | 30/37 (81%) | ||
WD 6 | 568..607 | 19/38 (50%) | |||
WD40 repeat | 573..599 | CDD:293791 | 12/25 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166334330 | |
Domainoid | 1 | 1.000 | 378 | 1.000 | Domainoid score | I818 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H37921 | |
Inparanoid | 1 | 1.050 | 618 | 1.000 | Inparanoid score | I852 |
OMA | 1 | 1.010 | - | - | QHG54336 | |
OrthoDB | 1 | 1.010 | - | - | D1453532at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001314 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9006 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101571 | |
Panther | 1 | 1.100 | - | - | O | PTHR12442 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X812 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.910 |