Protein Alignment Sdic2 and sw

DIOPT Version :10

• Sequence 1: NP_996516.1
• Gene: Sdic2 / 2768883
• FlyBaseID: FBgn0053497
• Length: 543
• Species: Drosophila melanogaster
• Sequence 2: NP_477075.2
• Gene: sw / 44160
• FlyBaseID: FBgn0003654
• Length: 663
• Species: Drosophila melanogaster
• Alignment Length: 571
• Identity: 523/571 - (91%)
• Similarity: 528/571 - (92%)
• Gaps: 36/571 - (6%)

  Fly     9 LRSTYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAF---------- 63
            |::|.:..|||||||||||||||||||||||||||||||||||||||||||||:.
  Fly    93 LQATVNGQSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLSCHSSPLSGYME 157

  Fly    64 --------------------------DAQGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAP 102
                                      |...|||||||||||||||||||||||||||||||||||
  Fly   158 DWWRPRKAHATDYYDEYNLNPGLEWEDEFTDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAP 222

  Fly   103 AITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDS 167
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   223 AITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDS 287

  Fly   168 EEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNT 232
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   288 EEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNT 352

  Fly   233 KFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHP 297
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   353 KFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHP 417

  Fly   298 VYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSVV 362
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|
  Fly   418 VYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLV 482

  Fly   363 MGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKD 427
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   483 MGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKD 547

  Fly   428 TKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRVSW 492
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   548 TKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRVSW 612

  Fly   493 TPSGLHVCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIKMNQSDEV 543
            |||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   613 TPSGLHVCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIKMNQSDEV 663

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sdic2	NP_996516.1	Dynein_IC2	21..51	CDD:463291	29/29 (100%)
		WD40	196..512	CDD:475233	314/315 (100%)
		WD40 repeat	196..245	CDD:293791	48/48 (100%)
		WD40 repeat	251..289	CDD:293791	37/37 (100%)
		WD40 repeat	298..337	CDD:293791	38/38 (100%)
		WD40 repeat	349..435	CDD:293791	84/85 (99%)
		WD40 repeat	441..479	CDD:293791	37/37 (100%)
		WD40 repeat	487..513	CDD:293791	25/25 (100%)
sw	NP_477075.2	Dynein_IC2	105..135	CDD:463291	29/29 (100%)
		WD40	316..632	CDD:475233	314/315 (100%)
		WD40 repeat	316..365	CDD:293791	48/48 (100%)
		WD40 repeat	371..409	CDD:293791	37/37 (100%)
		WD40 repeat	418..457	CDD:293791	38/38 (100%)
		WD40 repeat	469..555	CDD:293791	84/85 (99%)
		WD40 repeat	561..599	CDD:293791	37/37 (100%)
		WD40 repeat	607..633	CDD:293791	25/25 (100%)