DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sdic2 and dync1i2

DIOPT Version :10

Sequence 1:NP_996516.1 Gene:Sdic2 / 2768883 FlyBaseID:FBgn0053497 Length:543 Species:Drosophila melanogaster
Sequence 2:XP_012825730.1 Gene:dync1i2 / 407935 XenbaseID:XB-GENE-960812 Length:655 Species:Xenopus tropicalis


Alignment Length:53 Identity:15/53 - (28%)
Similarity:26/53 - (49%) Gaps:10/53 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 PFLQGNTQGAINFIYIIVSTHGALSTLIMVYLQKS-YREA--VVQIVGCNRKM 314
            |::.|:|  |:|     .:.|.::|..|.....|| :|:|  ...:|...||:
 Frog   180 PWIAGDT--ALN-----KNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sdic2NP_996516.1 Dynein_IC2 21..51 CDD:463291
WD40 196..512 CDD:475233 15/53 (28%)
WD40 repeat 196..245 CDD:293791
WD40 repeat 251..289 CDD:293791 6/23 (26%)
WD40 repeat 298..337 CDD:293791 7/20 (35%)
WD40 repeat 349..435 CDD:293791
WD40 repeat 441..479 CDD:293791
WD40 repeat 487..513 CDD:293791
dync1i2XP_012825730.1 Dynein_IC2 152..182 CDD:463291 1/1 (100%)
WD40 repeat 299..346 CDD:293791
WD40 <327..430 CDD:441893
WD40 397..>622 CDD:475233
WD40 repeat 451..498 CDD:293791
WD40 repeat 506..538 CDD:293791
WD40 repeat 544..582 CDD:293791
WD40 repeat 590..616 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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