Protein Alignment Sdic2 and CG1571

DIOPT Version :10

• Sequence 1: NP_996516.1
• Gene: Sdic2 / 2768883
• FlyBaseID: FBgn0053497
• Length: 543
• Species: Drosophila melanogaster
• Sequence 2: NP_572435.1
• Gene: CG1571 / 31725
• FlyBaseID: FBgn0029993
• Length: 651
• Species: Drosophila melanogaster
• Alignment Length: 474
• Identity: 114/474 - (24%)
• Similarity: 193/474 - (40%)
• Gaps: 75/474 - (15%)

  Fly   117 KEVNELSEEQKQMIILSENFQRFVVRAGRVIERALS------------ENVDIYTDYIGGGDSEE 169
            ||||...|||.|      ..::.|.|.....|:.||            ..::||.::......|.
  Fly    83 KEVNFNDEEQTQ------RHRKKVEREDSWGEQVLSMIRTTMSVAEQNNTLNIYQNFFADLPPEL 141

  Fly   170 ANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNN-------EESPNEPDGVV 227
            .:|.:...|..:..||:| .|...|.:.|::|..:.....:..|.|:       ....:||.|..
  Fly   142 GHDIKMRFRARVANVFHD-LWLPARQLRSIEWMPNNSRQFMTQYTNHFAKGERLRPVTDEPFGGT 205

  Fly   228 ---MVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPL 289
               .||:.| ....|...:..:..|........:.|.::|||..||:.|| ...:...||:..||
  Fly   206 NGFYVWDVK-NPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLW-GTFKGGLPIRNCPL 268

  Fly   290 SAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTL----ELQQRQSK--AIAI 348
            . .:|......|..|.:::.....|.|.||.:..|....|..|...|    |.|:|||:  :..:
  Fly   269 E-VSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQSRMDSHGV 332

  Fly   349 TSMAFPANEINSVVMGSEDGYVYSASRHGL--RSGVNEVYERHLGPITGISTHYNQLSPDFGHLF 411
            |.:.|........::||:.|:|:..:|.|:  ...:...|:..:||:..|:.     :|.|...|
  Fly   333 TVLEFEYTIPVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVRSINR-----NPFFVKNF 392

  Fly   412 LTSSIDWTIKLWS--LKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNL------ 468
            |.:. ||..::||  :||:.....|..|:. ::..|||....:||...|.:|.:|.|:|
  Fly   393 LVTG-DWRARIWSEEVKDSPSTMYFRKNAQ-ILCGAWSTGRCSLFVTGDINGVVDFWDLLLHHRK 455

  Fly   469 ---NQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDE----WS 526
               :.|.:|..|.:|           :.|.|..:.||.:.|..::..:.|::.|.:..|    .:
  Fly   456 PIRSVDFKVAIADLV-----------FRPEGDLLAIGLKNGDTHIMTLDESMRQATGKEKALMAA 509

  Fly   527 RFNTHLSEIKMNQS--DEV 543
            .|...:...|:.::  |||
  Fly   510 MFEREIVRCKLLEARYDEV 528

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sdic2	NP_996516.1	Dynein_IC2	21..51	CDD:463291
		WD40	196..512	CDD:475233	83/344 (24%)
		WD40 repeat	196..245	CDD:293791	11/58 (19%)
		WD40 repeat	251..289	CDD:293791	10/37 (27%)
		WD40 repeat	298..337	CDD:293791	10/42 (24%)
		WD40 repeat	349..435	CDD:293791	22/89 (25%)
		WD40 repeat	441..479	CDD:293791	13/46 (28%)
		WD40 repeat	487..513	CDD:293791	5/25 (20%)
CG1571	NP_572435.1	WD40	210..462	CDD:475233	67/261 (26%)
		WD40 repeat	229..269	CDD:293791	12/40 (30%)
		WD40 repeat	277..325	CDD:293791	13/47 (28%)
		WD40 repeat	332..369	CDD:293791	8/36 (22%)
		WD40 repeat	379..415	CDD:293791	11/41 (27%)
		WD40 repeat	422..447	CDD:293791	8/24 (33%)