Sequence 1: | NP_001285481.1 | Gene: | Sdic2 / 2768883 | FlyBaseID: | FBgn0053497 | Length: | 543 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001005542.2 | Gene: | Dync2i2 / 296618 | RGDID: | 1359465 | Length: | 537 | Species: | Rattus norvegicus |
Alignment Length: | 520 | Identity: | 128/520 - (24%) |
---|---|---|---|
Similarity: | 216/520 - (41%) | Gaps: | 68/520 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 GGGNGDVLAFDAQGDDEESSLQNLGNGFTSKL-----PPGYLTHGLPTVKDVAPAITPLEIKKET 113
Fly 114 EVKKEVNELSE-EQKQMIILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDSEEAN-DERSH 176
Fly 177 ARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTK---FKKST 238
Fly 239 PEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVY-CLQ 302
Fly 303 MVGTQNAH--NVISISSDGKLCSW--------------SLDMLSQPQDT-LELQQRQSKAIAITS 350
Fly 351 MAFPANEINSVVMGSEDGYVYSASRHG-------------LRSGVNEVYERHLGPITGISTHYNQ 402
Fly 403 LSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWN 467
Fly 468 LNQDTEVPTASIVVA--GAPALNRVSWTPSGLHVCIGDEAGKLYVYDV-----------AENLAQ 519
Fly 520 519 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sdic2 | NP_001285481.1 | Dynein_IC2 | 23..51 | CDD:288403 | |
NtpH | 108..>178 | CDD:225368 | 14/71 (20%) | ||
WD40 | 196..512 | CDD:295369 | 94/351 (27%) | ||
WD40 repeat | 196..245 | CDD:293791 | 9/51 (18%) | ||
WD40 | <224..523 | CDD:225201 | 94/343 (27%) | ||
WD40 repeat | 251..289 | CDD:293791 | 12/37 (32%) | ||
WD40 repeat | 298..337 | CDD:293791 | 12/56 (21%) | ||
WD40 repeat | 349..435 | CDD:293791 | 27/98 (28%) | ||
WD40 repeat | 441..479 | CDD:293791 | 15/37 (41%) | ||
WD40 repeat | 487..513 | CDD:293791 | 4/25 (16%) | ||
Dync2i2 | NP_001005542.2 | WD40 | 101..515 | CDD:225201 | 107/427 (25%) |
WD40 repeat | 165..211 | CDD:293791 | 7/45 (16%) | ||
WD40 | 218..515 | CDD:295369 | 85/301 (28%) | ||
WD40 repeat | 223..265 | CDD:293791 | 13/41 (32%) | ||
WD40 repeat | 271..309 | CDD:293791 | 8/37 (22%) | ||
WD40 repeat | 339..389 | CDD:293791 | 12/49 (24%) | ||
WD40 repeat | 396..433 | CDD:293791 | 12/41 (29%) | ||
WD40 repeat | 439..479 | CDD:293791 | 17/39 (44%) | ||
WD40 repeat | 486..511 | CDD:293791 | 3/24 (13%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1587 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1453532at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |