DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sdic2 and DNAI3

DIOPT Version :10

Sequence 1:NP_996516.1 Gene:Sdic2 / 2768883 FlyBaseID:FBgn0053497 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_660155.2 Gene:DNAI3 / 126820 HGNCID:30711 Length:891 Species:Homo sapiens


Alignment Length:624 Identity:111/624 - (17%)
Similarity:204/624 - (32%) Gaps:223/624 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIY 158
            :|.:||::.. |.....|....:....|.|||:|:.:..|:....|:..|...:|.||.:| :|.
Human   235 IPQIKDISTQ-TKWTYPKNATTQYYPREFSEEEKETLKQSKPLVDFLNNASISVEIALQQN-EIM 297

  Fly   159 TDYIGG----GDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGS------- 212
            ..:|..    .:.|....:::...|...:.|.|......:.||.:.|......|:..|       
Human   298 NTFIDDWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIAVSVAVRLSF 362

  Fly   213 ---YHNNEESPNEPDGVVMVW------NTKFKKSTPEDVFHCQSAVMSTCFAKF---NPNLILGG 265
               .|.:.:...:| .:::.|      :.:....:|:|:|         || ||   :||:|.||
Human   363 EDRVHFSGKLLLQP-SLILFWSFSDPIHPQLMLESPDDIF---------CF-KFCPSDPNIIAGG 416

  Fly   266 TYSGQIVLWD-----NRVQ---------KRTPIQRTPLSAAAHTHPVYCLQ-------------- 302
            ..:||||:||     :|::         ||..::           |::.|:              
Human   417 CINGQIVMWDITAHADRIENIKAGGSRSKRATLK-----------PMFLLEPESNKEAMYIRHCA 470

  Fly   303 MVGTQNAH-------------------------------NVISISSDGKLCSW------------ 324
            :...:|.|                               .:::.|:|..:|.|            
Human   471 VSSIENGHKKVITDIHWLSDTFEINRMGSVFENRSGICCQLVTCSADCTICFWDIRPQKPLTPQT 535

  Fly   325 ---------------------------------------SLD------------MLSQPQDTLEL 338
                                                   |||            :|.:.||.:..
Human   536 TEKKKEESIEIPFDVPSTFLHLDLSWKPLTKVRLSKGETSLDHCPTKISLNEDHLLCKTQDKMLA 600

  Fly   339 QQRQSKA----------IAITSMAFPANEI-NSVVMGSEDG-YVYS------------------A 373
            |.:..||          ..:.::..|.::. ....:|:|:| .:|:                  .
Human   601 QSKTEKAEEMNPYHNLESGMANLLKPIDDFCTKFFVGTEEGEVIYTDWKMEKDPETGRLMSKKPV 665

  Fly   374 SRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKD---TKPLYSFE 435
            |.|.:..|               :.|..|.||.:..:.||.. .|.:.:|  |:   |.||....
Human   666 SHHTIHDG---------------TVHTIQRSPFYNDIILTVG-GWNVAIW--KEGVMTGPLLQSC 712

  Fly   436 DNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTAS--IVVAGAPALNRVSWTPSGLH 498
            ..........||...|.:|......|.:|:|:|.:.|..|..|  |.:.....:....::.....
Human   713 CAPKRYTSGHWSLTRPGVFYIGREDGYIDIWDLLEKTHEPAQSQNICITMITYIKPWIFSSKQQF 777

  Fly   499 VCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLS-EIK 536
            :...|..|.|::.::...|::||.:|.:..|.:.. |:|
Human   778 IATADYYGTLHILEIPWTLSRPSTNEMASVNHYFEREVK 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sdic2NP_996516.1 Dynein_IC2 21..51 CDD:463291
WD40 196..512 CDD:475233 81/491 (16%)
WD40 repeat 196..245 CDD:293791 11/64 (17%)
WD40 repeat 251..289 CDD:293791 18/54 (33%)
WD40 repeat 298..337 CDD:293791 13/146 (9%)
WD40 repeat 349..435 CDD:293791 20/108 (19%)
WD40 repeat 441..479 CDD:293791 11/39 (28%)
WD40 repeat 487..513 CDD:293791 3/25 (12%)
DNAI3NP_660155.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
WD 1. /evidence=ECO:0000255 395..435 19/49 (39%)
WD40 476..524 CDD:197651 5/47 (11%)
WD 2. /evidence=ECO:0000255 477..533 5/55 (9%)
WD 3. /evidence=ECO:0000255 670..709 12/56 (21%)
WD 4. /evidence=ECO:0000255 713..753 9/39 (23%)
Blue background indicates that the domain is not in the aligned region.

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