DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rai1 and eol-1

DIOPT Version :10

Sequence 1:NP_996492.1 Gene:Rai1 / 2768882 FlyBaseID:FBgn0030793 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001123023.1 Gene:eol-1 / 6418775 WormBaseID:WBGene00045401 Length:316 Species:Caenorhabditis elegans


Alignment Length:318 Identity:62/318 - (19%)
Similarity:112/318 - (35%) Gaps:88/318 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 TYIKQHQKELL-----------------------------------------------RQSSSDA 108
            ||.|||.|:.:                                               |::::..
 Worm    12 TYFKQHDKKAIPGKLPNRLNDDPDLYGKLKYPLALSLGCKDFKDEGGGDVYESIFDFTRKTANRG 76

  Fly   109 RNLR--LDSDFVTLRGILRQIMCLQYDNRS-FRVKATLLNGNVYMCKEETPEQQLENANMSRAQR 170
            .:|:  :|:|..:.|..|..|......||. ..:.|...||.:::.|.|            ::..
 Worm    77 TSLKETIDADIFSNRSNLTTIATASKFNREPSEIIALRKNGVIFLYKNE------------KSYE 129

  Fly   171 VMCSWGFKFEQYLTSAQAQGKPVTNVPVNEAEEFMGVYRTNLAG----ILMLYGAELDCVDSKEP 231
            .....|:.||:|:|..:.......|..|:.|.....|.||:...    |.:.|.:|:|.||... 
 Worm   130 GKYGGGYNFEKYMTLNEVGHPHNPNEKVSNATCSKVVLRTSFVSRKETIKVYYASEVDAVDKNG- 193

  Fly   232 VDFKDCRVLDSLKFVELKTSVFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYVGLRDTKGMLQR 296
                        .|||:|::   .:.|  ..:..:.|...:.||||..:.|:.:|.:|....:.:
 Worm   194 ------------NFVEMKST---KSDH--GKWLHWNSQKHYFQSFLGNVPTILIGRKDQNDCVYQ 241

  Fly   297 IDEIDVATLAR-NKPWSASAMAWYLEQFLRNLKKLLVNINDPFAVVQVTFLNKHASYE 353
            :|:|..:.:.: :..|.....   |.|....|.|::..:.|....:.|...:...|||
 Worm   242 VDKIKTSEIPKMDVKWKVQNC---LAQLFTVLNKIMSKLPDDDQAISVKIADGEISYE 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rai1NP_996492.1 RAI1 224..296 CDD:462550 16/71 (23%)
eol-1NP_001123023.1 None

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