DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rai1 and C37H5.14

DIOPT Version :10

Sequence 1:NP_996492.1 Gene:Rai1 / 2768882 FlyBaseID:FBgn0030793 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001300056.1 Gene:C37H5.14 / 6418705 WormBaseID:WBGene00045308 Length:322 Species:Caenorhabditis elegans


Alignment Length:175 Identity:32/175 - (18%)
Similarity:58/175 - (33%) Gaps:42/175 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EAIAAVHELSFAVQSISVSEMLPRTPDLIFVNVTTLEAQPYCLELTLKGWRITSLRS-------- 85
            |.::.....|.:..|:|:|..||:...               |.:....|.|...|:        
 Worm     6 ERLSVSSSSSSSSSSLSLSTALPKGDS---------------LPIDADSWMIAEERAHEILCTIQ 55

  Fly    86 DCMVGDFTRLELFTKYYDSLYLLMDDISPGYRERFSEKLVQRLKLIEAGEEDQVA---------- 140
            ..:|.|.:|.|:. .|..:|.:..:.|     |.||...|.....:..|:.|...          
 Worm    56 PALVSDRSRNEII-DYVRTLIMSHEGI-----EVFSFGSVPLKTYLPDGDIDLTVLTKQNMDDDF 114

  Fly   141 ---PCASLQSPSLSTDSSSKESQYSSTESLPIVTPVSTPAIDPDF 182
               .|:.||:....::..:.:.|:...:...|...:...|:|..|
 Worm   115 YGQLCSRLQNEERESEFHATDVQFIPAQVKVIKCNIRNIAVDISF 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rai1NP_996492.1 RAI1 224..296 CDD:462550
C37H5.14NP_001300056.1 None
Blue background indicates that the domain is not in the aligned region.

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