DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rai1 and dxo

DIOPT Version :10

Sequence 1:NP_996492.1 Gene:Rai1 / 2768882 FlyBaseID:FBgn0030793 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_012823852.2 Gene:dxo / 549142 XenbaseID:XB-GENE-481057 Length:424 Species:Xenopus tropicalis


Alignment Length:392 Identity:97/392 - (24%)
Similarity:169/392 - (43%) Gaps:57/392 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LGAMYNTPFPSISRPKCIGVCSINASREFVDDASCASYLAGQPWPPL--------PFDLNGGIED 73
            |.::|...||....|..:|..|::.:|::..|.....|.:    ||:        .:::..|.|.
 Frog    44 LHSLYQGSFPFYRLPSEVGHFSLDENRQYHQDNRKLRYYS----PPVGIRKKDSPGWNVMDGYES 104

  Fly    74 VIRKPVENGKRDLEIMLTYIKQHQKELLRQSSSDARNLRLDSDFVTLRGILRQIMCLQYDNR-SF 137
            ...:..|..|..|..:||:::::|..|.......::. .:|.||||.||.|.:::|..|:.: .:
 Frog   105 HYVRRNEEEKEGLLHILTWLEKNQSVLGTHVEGGSKR-PIDRDFVTWRGHLTKLLCTPYETQEGW 168

  Fly   138 RVKATLLNGNVYMCKEETPEQQLENANMSRAQRVMCSWGFKFEQYLTSAQAQG------------ 190
            .:..||..|..|:.:.||...:.:....::.|..:...|:|||.|:.:....|            
 Frog   169 LLAVTLFKGTFYISERETEAARKKREERTQEQERLMYSGYKFESYICADGPYGSDQMDILQDNLK 233

  Fly   191 ----------KPVTNVPVNEAEEFMGVYRTNLAGILMLYGAELDCVDSKEPVDFKDCRVLDSLKF 245
                      :|..:..||..|.:..|....|....:|...|:||.|......      :....:
 Frog   234 LRTVPDSPDRQPSQSAVVNTNEAYCSVLLARLTSHSLLISGEVDCTDPSAKSS------IPPSSY 292

  Fly   246 VELKTSVFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYVGLRDTKGMLQRIDEI---DVATLAR 307
            :|||||....||||.|:|..:|...||.||||:||..:..|.|..:|.:..::..   |:..|.|
 Frog   293 IELKTSAQIRNPHQQRSFNRYKLLKWWCQSFLLGIPIIVAGFRSQEGKIVSLETFKTSDIPHLVR 357

  Fly   308 NK--PWSASAMAWYLEQFLRNLKKLLVNINDPFAVVQVTFL-----NKHASYEVLRGPEHQILPN 365
            .:  .|..:....:..:||.:: |.:|..:||    ::.:|     ....::.|...||:.|||:
 Frog   358 GERNSWDPAVCMNFCNKFLSHI-KAVVTKDDP----RLVYLFAWEPGSDVTFTVHNDPEYTILPS 417

  Fly   366 WY 367
            ||
 Frog   418 WY 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rai1NP_996492.1 RAI1 224..296 CDD:462550 26/71 (37%)
dxoXP_012823852.2 RAI1 276..343 CDD:462550 26/72 (36%)

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