DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rai1 and M01G12.7

DIOPT Version :10

Sequence 1:NP_996492.1 Gene:Rai1 / 2768882 FlyBaseID:FBgn0030793 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_493060.1 Gene:M01G12.7 / 187384 WormBaseID:WBGene00010821 Length:460 Species:Caenorhabditis elegans


Alignment Length:392 Identity:91/392 - (23%)
Similarity:147/392 - (37%) Gaps:128/392 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SRPKCIGVCSINASREFVDDASCASYLAGQPWPPLPFDLNGGIEDVIRKPVENGKRDLEIMLTYI 93
            ||||     ::|.:..:.|          :|:..|| .|:|..:|     :..|:.|||..|.:|
 Worm    26 SRPK-----TLNKNSTYFD----------RPYQTLP-SLDGEFDD-----LGGGEFDLESFLQFI 69

  Fly    94 KQHQKELLRQSSSDARNLRLDSDFVTLRGILRQIMCLQYDNRSFRVKATLLNGNVYMCKEETPEQ 158
            :  ||:|...:.:       ..||||.:.:|..|       .|| |..|..:|:|         |
 Worm    70 R--QKDLYEGNCN-------KPDFVTNKNLLATI-------ASF-VPPTESSGSV---------Q 108

  Fly   159 QLEN--------------ANMSRAQR----VMCSWGFKFEQYLTSAQAQGKPVTNVPVNEAEEFM 205
            |.||              |.:|:..:    ..||  |.||..||.|.....|:.|..||:     
 Worm   109 QKENIQILVVRVGGVYYLAKLSKENKKHRLFDCS--FVFEHILTRATEDEMPMANGIVNK----- 166

  Fly   206 GVYRTNL-----AGILMLYGAELDCVDSKEPVDFKDCRVLDSLKFVELKTSVFNMNPHQIRTFKS 265
            ||::..:     ....:||..|||.||             |....||||.....:..|..:    
 Worm   167 GVFKMEVPLGDGTFCTVLYTGELDAVD-------------DRNNHVELKLFEGGLTEHVWK---- 214

  Fly   266 FKSANW--WSQSFLVGITTLYVGLRDTKGMLQRIDE---------IDVATLARN-------KPWS 312
             :.:.|  | |||...:.||.:|.|:...:|:..|.         .|:.|.:|.       |.:.
 Worm   215 -RRSQWMFW-QSFFSNVLTLIIGSRNHPSLLEITDAKFDWPTNVLYDIETRSREEILEEVAKRFE 277

  Fly   313 ASAMAWYLE-------QFLRNLKKLLVNINDPFAVVQVTFLNKHASYEVLRGPEHQILPNWYRDL 370
            .:...|.:|       .|...:|..:....|.:.:.     |..:.:::.:  :||.|...:|.:
 Worm   278 GTEDHWTIEDGQKRLQSFFNLIKNSVKKDRDCYVIT-----NDGSQWKIEQ--DHQKLAGTFRHV 335

  Fly   371 LK 372
            ::
 Worm   336 VE 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rai1NP_996492.1 RAI1 224..296 CDD:462550 19/73 (26%)
M01G12.7NP_493060.1 None

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